G1487380


Basic Information

Item Value
gene id G1487380
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74669289 ~ 74669488 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700626
GGTACATAAAGAACCAGGTCACCTTTCAAAAGAATGGGGTGCATTATCTAGCGAGCAAGACGTGCGATCAGACACAAGACAAGGGCTTCCCAGACAGGGACTGGAGCCAATGAATGGTGCACTCTGAAAAGAGGGGCCTCGTGTTTCAGCGCTGAAGGAGACGACTCAGACGAGCACCGTCTCCTGGTGTGTCATATGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700626 True 200 lncRNA 0.52 1 74669289 74669488

Neighbor

gene id symbol gene type direction distance location
LOC110494561 LOC106565779 coding upstream 13284 74644178 ~ 74656005 (+)
LOC110494558 LOC106565781 coding upstream 33575 74625985 ~ 74635714 (+)
LOC110494557 LOC106565945 coding upstream 47195 74617817 ~ 74622094 (+)
LOC110494553 LOC106565783 coding upstream 139416 74517673 ~ 74529873 (+)
LOC110493253 LOC106565927 coding upstream 151851 74510781 ~ 74517438 (+)
LOC110494562 LOC106565780 coding downstream 6002 74675490 ~ 74681473 (+)
adnpa LOC106565775 coding downstream 66733 74736221 ~ 74741481 (+)
LOC110494565 LOC106565774 coding downstream 76699 74746187 ~ 74749119 (+)
LOC118940106 NA coding downstream 99144 74768632 ~ 74770253 (+)
opn1sw2 LOC100135984 coding downstream 170060 74839548 ~ 74842075 (+)
G1487379 NA non-coding upstream 269 74668715 ~ 74669020 (+)
G1487377 NA non-coding upstream 2217 74666760 ~ 74667072 (+)
G1487375 NA non-coding upstream 8494 74660491 ~ 74660795 (+)
G1487345 NA non-coding upstream 11514 74657423 ~ 74657775 (+)
G1487346 NA non-coding upstream 11955 74656678 ~ 74657334 (+)
G1487394 NA non-coding downstream 23450 74692938 ~ 74693142 (+)
G1487407 LOC106565776 non-coding downstream 43759 74713247 ~ 74715641 (+)
G1487411 NA non-coding downstream 50435 74719923 ~ 74720488 (+)
G1487412 NA non-coding downstream 51057 74720545 ~ 74721117 (+)
G1487419 NA non-coding downstream 59653 74729141 ~ 74729375 (+)
LOC110493252 LOC106565788 other upstream 260100 74388428 ~ 74432420 (+)
G1486811 NA other upstream 689854 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1387270 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1543933 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1623701 73044346 ~ 73049958 (+)
G1490016 NA other downstream 2014111 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3338802 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3348880 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3519524 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3583141 78252629 ~ 78253308 (+)

Expression


Co-expression Network