G1487394


Basic Information

Item Value
gene id G1487394
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74692938 ~ 74693142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700640
gtgtatcaagaatggtccaccaccaaaaggacatccagccaacttgacgcaactgtgggaagcattggagtcaacatgggccagcatccctgtggaactttttcgacatcttgtagagtccaaaATGGGTAGTGCAACTGTacactcggtgtgtgtgtgtgtgtgtgtggtggaagtAGCTAGAGGATGACGCGCTCAttgtaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700640 True 205 lncRNA 0.49 1 74692938 74693142

Neighbor

gene id symbol gene type direction distance location
LOC110494562 LOC106565780 coding upstream 11465 74675490 ~ 74681473 (+)
LOC110494561 LOC106565779 coding upstream 36933 74644178 ~ 74656005 (+)
LOC110494558 LOC106565781 coding upstream 57224 74625985 ~ 74635714 (+)
LOC110494557 LOC106565945 coding upstream 70844 74617817 ~ 74622094 (+)
LOC110494553 LOC106565783 coding upstream 163065 74517673 ~ 74529873 (+)
adnpa LOC106565775 coding downstream 43079 74736221 ~ 74741481 (+)
LOC110494565 LOC106565774 coding downstream 53045 74746187 ~ 74749119 (+)
LOC118940106 NA coding downstream 75490 74768632 ~ 74770253 (+)
opn1sw2 LOC100135984 coding downstream 146406 74839548 ~ 74842075 (+)
LOC110493256 LOC106565770 coding downstream 160984 74854126 ~ 74858312 (+)
G1487380 NA non-coding upstream 23450 74669289 ~ 74669488 (+)
G1487379 NA non-coding upstream 23918 74668715 ~ 74669020 (+)
G1487377 NA non-coding upstream 25866 74666760 ~ 74667072 (+)
G1487375 NA non-coding upstream 32143 74660491 ~ 74660795 (+)
G1487345 NA non-coding upstream 35163 74657423 ~ 74657775 (+)
G1487407 LOC106565776 non-coding downstream 20105 74713247 ~ 74715641 (+)
G1487411 NA non-coding downstream 26781 74719923 ~ 74720488 (+)
G1487412 NA non-coding downstream 27403 74720545 ~ 74721117 (+)
G1487419 NA non-coding downstream 35999 74729141 ~ 74729375 (+)
G1487423 NA non-coding downstream 50448 74743590 ~ 74743809 (+)
LOC110493252 LOC106565788 other upstream 283749 74388428 ~ 74432420 (+)
G1486811 NA other upstream 713503 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1410919 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1567582 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1647350 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1990457 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3315148 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3325226 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3495870 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3559487 78252629 ~ 78253308 (+)

Expression


Co-expression Network