G1487419


Basic Information

Item Value
gene id G1487419
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74729141 ~ 74729375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700668
TCAGTGAAGAGCAGTCCACCCAGTCTTGCAACACCTCTGGTGGTGGGAAACATTTCCCTCACCTGTCAGTAGAGTGCTTGTCTGAAATGGGTGAAGGGCAGTTCCACTCTCGTGTTCAGTGAATTatccatgttctctctcctctctcttcttctcctcccacTGTCTCCTGTGTTGTTCATTTTTTCTTCATATTCTGTTCTCAATCGTACCAgttcttcttcctctcttctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700668 True 235 lncRNA 0.46 1 74729141 74729375

Neighbor

gene id symbol gene type direction distance location
LOC110494562 LOC106565780 coding upstream 47668 74675490 ~ 74681473 (+)
LOC110494561 LOC106565779 coding upstream 73136 74644178 ~ 74656005 (+)
LOC110494558 LOC106565781 coding upstream 93427 74625985 ~ 74635714 (+)
LOC110494557 LOC106565945 coding upstream 107047 74617817 ~ 74622094 (+)
LOC110494553 LOC106565783 coding upstream 199268 74517673 ~ 74529873 (+)
adnpa LOC106565775 coding downstream 6846 74736221 ~ 74741481 (+)
LOC110494565 LOC106565774 coding downstream 16812 74746187 ~ 74749119 (+)
LOC118940106 NA coding downstream 39257 74768632 ~ 74770253 (+)
opn1sw2 LOC100135984 coding downstream 110173 74839548 ~ 74842075 (+)
LOC110493256 LOC106565770 coding downstream 124751 74854126 ~ 74858312 (+)
G1487412 NA non-coding upstream 8024 74720545 ~ 74721117 (+)
G1487411 NA non-coding upstream 8653 74719923 ~ 74720488 (+)
G1487407 LOC106565776 non-coding upstream 13500 74713247 ~ 74715641 (+)
G1487394 NA non-coding upstream 35999 74692938 ~ 74693142 (+)
G1487380 NA non-coding upstream 59653 74669289 ~ 74669488 (+)
G1487423 NA non-coding downstream 14215 74743590 ~ 74743809 (+)
G1487639 NA non-coding downstream 22543 74751918 ~ 74752128 (+)
G1487640 gata1 non-coding downstream 23384 74752759 ~ 74763619 (+)
G1487644 NA non-coding downstream 43186 74772561 ~ 74772783 (+)
G1487650 NA non-coding downstream 57683 74787058 ~ 74787346 (+)
LOC110493252 LOC106565788 other upstream 319952 74388428 ~ 74432420 (+)
G1486811 NA other upstream 749706 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1447122 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1603785 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1683553 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1954224 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3278915 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3288993 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3459637 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3523254 78252629 ~ 78253308 (+)

Expression


Co-expression Network