G1487423


Basic Information

Item Value
gene id G1487423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74743590 ~ 74743809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700672
gtatggcgaagtacacttccaagcaagggctttgggatggatatgcaatatggcagtcgtgccaacatatctcatcagccacctggtggaagggactttgtgaatctgaggctctttcccctgttgcctccaccatcctccaaatcccaccatgAGCTGCCTCAGagtgcaactggtccttgttttggaacacacacactaaggcacgcaacaggctgac

Function

NR:

description
uncharacterized protein LOC106676627

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700672 True 220 lncRNA 0.52 1 74743590 74743809

Neighbor

gene id symbol gene type direction distance location
adnpa LOC106565775 coding upstream 2109 74736221 ~ 74741481 (+)
LOC110494562 LOC106565780 coding upstream 62117 74675490 ~ 74681473 (+)
LOC110494561 LOC106565779 coding upstream 87585 74644178 ~ 74656005 (+)
LOC110494558 LOC106565781 coding upstream 107876 74625985 ~ 74635714 (+)
LOC110494557 LOC106565945 coding upstream 121496 74617817 ~ 74622094 (+)
LOC110494565 LOC106565774 coding downstream 2378 74746187 ~ 74749119 (+)
LOC118940106 NA coding downstream 24823 74768632 ~ 74770253 (+)
opn1sw2 LOC100135984 coding downstream 95739 74839548 ~ 74842075 (+)
LOC110493256 LOC106565770 coding downstream 110317 74854126 ~ 74858312 (+)
LOC100135982 LOC100136940 coding downstream 115105 74858914 ~ 74861767 (+)
G1487419 NA non-coding upstream 14215 74729141 ~ 74729375 (+)
G1487412 NA non-coding upstream 22473 74720545 ~ 74721117 (+)
G1487411 NA non-coding upstream 23102 74719923 ~ 74720488 (+)
G1487407 LOC106565776 non-coding upstream 27949 74713247 ~ 74715641 (+)
G1487394 NA non-coding upstream 50448 74692938 ~ 74693142 (+)
G1487639 NA non-coding downstream 8109 74751918 ~ 74752128 (+)
G1487640 gata1 non-coding downstream 8950 74752759 ~ 74763619 (+)
G1487644 NA non-coding downstream 28752 74772561 ~ 74772783 (+)
G1487650 NA non-coding downstream 43249 74787058 ~ 74787346 (+)
G1487771 NA non-coding downstream 127811 74871620 ~ 74871843 (+)
LOC110493252 LOC106565788 other upstream 334401 74388428 ~ 74432420 (+)
G1486811 NA other upstream 764155 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1461571 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1618234 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1698002 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1939790 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3264481 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3274559 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3445203 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3508820 78252629 ~ 78253308 (+)

Expression


Co-expression Network