G1487778


Basic Information

Item Value
gene id G1487778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74875182 ~ 74875389 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1701107
gcgaacggttgaaaagcatgcatttggttttactagcatttaaaagcagttggaggccacggaaggagtgttgtatggcattgaagctcgtttggaggttagttagcacagtatccaaggaagggccagaagtatacagaatggtgtcttctgcgtagaggtggatcagggaatcacccgcagcaagagcgacatcattgatatatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1701107 True 208 lncRNA 0.46 1 74875182 74875389

Neighbor

gene id symbol gene type direction distance location
LOC100135982 LOC100136940 coding upstream 13415 74858914 ~ 74861767 (+)
LOC110493256 LOC106565770 coding upstream 16870 74854126 ~ 74858312 (+)
opn1sw2 LOC100135984 coding upstream 33107 74839548 ~ 74842075 (+)
LOC118940106 NA coding upstream 104929 74768632 ~ 74770253 (+)
LOC110494565 LOC106565774 coding upstream 126063 74746187 ~ 74749119 (+)
gnl3l gnl3l coding downstream 1804 74877193 ~ 74895463 (+)
LOC110494570 LOC106565767 coding downstream 42875 74918264 ~ 74928441 (+)
cxxc1b LOC106565764 coding downstream 62379 74937768 ~ 74943605 (+)
mbd1b LOC106565762 coding downstream 75309 74950698 ~ 74968199 (+)
ccdc120 LOC106565760 coding downstream 92968 74968357 ~ 74997618 (+)
G1487771 NA non-coding upstream 3339 74871620 ~ 74871843 (+)
G1487650 NA non-coding upstream 87836 74787058 ~ 74787346 (+)
G1487644 NA non-coding upstream 102399 74772561 ~ 74772783 (+)
G1487640 gata1 non-coding upstream 111563 74752759 ~ 74763619 (+)
G1487639 NA non-coding upstream 123054 74751918 ~ 74752128 (+)
G1487790 NA non-coding downstream 24044 74899433 ~ 74899684 (+)
G1487809 NA non-coding downstream 54293 74929682 ~ 74929897 (+)
G1487813 NA non-coding downstream 69510 74944899 ~ 74945117 (+)
G1487838 LOC106582872 non-coding downstream 132077 75007466 ~ 75012176 (+)
G1487973 NA non-coding downstream 163608 75038997 ~ 75039259 (+)
LOC110493252 LOC106565788 other upstream 465993 74388428 ~ 74432420 (+)
G1486811 NA other upstream 895747 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1593163 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1749826 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1829594 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1808210 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3132901 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3142979 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3313623 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3377240 78252629 ~ 78253308 (+)

Expression


Co-expression Network