Gene
RNA
| Item | Value |
|---|---|
| gene id | G1487790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 74899433 ~ 74899684 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1701119 | True | 252 | lncRNA | 0.53 | 1 | 74899433 | 74899684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gnl3l | gnl3l | coding | upstream | 3970 | 74877193 ~ 74895463 (+) |
| LOC100135982 | LOC100136940 | coding | upstream | 37666 | 74858914 ~ 74861767 (+) |
| LOC110493256 | LOC106565770 | coding | upstream | 41121 | 74854126 ~ 74858312 (+) |
| opn1sw2 | LOC100135984 | coding | upstream | 57358 | 74839548 ~ 74842075 (+) |
| LOC118940106 | NA | coding | upstream | 129180 | 74768632 ~ 74770253 (+) |
| LOC110494570 | LOC106565767 | coding | downstream | 18580 | 74918264 ~ 74928441 (+) |
| cxxc1b | LOC106565764 | coding | downstream | 38084 | 74937768 ~ 74943605 (+) |
| mbd1b | LOC106565762 | coding | downstream | 51014 | 74950698 ~ 74968199 (+) |
| ccdc120 | LOC106565760 | coding | downstream | 68673 | 74968357 ~ 74997618 (+) |
| LOC110494575 | LOC106565759 | coding | downstream | 100392 | 75000076 ~ 75014313 (+) |
| G1487778 | NA | non-coding | upstream | 24044 | 74875182 ~ 74875389 (+) |
| G1487771 | NA | non-coding | upstream | 27590 | 74871620 ~ 74871843 (+) |
| G1487650 | NA | non-coding | upstream | 112087 | 74787058 ~ 74787346 (+) |
| G1487644 | NA | non-coding | upstream | 126650 | 74772561 ~ 74772783 (+) |
| G1487640 | gata1 | non-coding | upstream | 135814 | 74752759 ~ 74763619 (+) |
| G1487809 | NA | non-coding | downstream | 29998 | 74929682 ~ 74929897 (+) |
| G1487813 | NA | non-coding | downstream | 45215 | 74944899 ~ 74945117 (+) |
| G1487838 | LOC106582872 | non-coding | downstream | 107782 | 75007466 ~ 75012176 (+) |
| G1487973 | NA | non-coding | downstream | 139313 | 75038997 ~ 75039259 (+) |
| G1487979 | NA | non-coding | downstream | 143253 | 75042937 ~ 75043140 (+) |
| LOC110493252 | LOC106565788 | other | upstream | 490244 | 74388428 ~ 74432420 (+) |
| G1486811 | NA | other | upstream | 919998 | 73978890 ~ 73979435 (+) |
| G1485819 | NA | other | upstream | 1617414 | 73281260 ~ 73282019 (+) |
| G1485260 | NA | other | upstream | 1774077 | 73122826 ~ 73125356 (+) |
| LOC110494525 | LOC106565811 | other | upstream | 1853845 | 73044346 ~ 73049958 (+) |
| G1490016 | NA | other | downstream | 1783915 | 76683599 ~ 76684020 (+) |
| G1491886 | NA | other | downstream | 3108606 | 78008290 ~ 78008799 (+) |
| G1491899 | NA | other | downstream | 3118684 | 78018368 ~ 78019816 (+) |
| G1491963 | NA | other | downstream | 3289328 | 78189012 ~ 78190290 (+) |
| G1492003 | NA | other | downstream | 3352945 | 78252629 ~ 78253308 (+) |
