G1487809


Basic Information

Item Value
gene id G1487809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74929682 ~ 74929897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1701139
GTGATGGGTCATGTCCAGCAAAGGTTCCAGGGAATCAGGCTGACAGCAGCACACTGGAGCAAAGGGAGGAACACAGGGATGAGGCACAGGCATGGCATCCTTTCCCCGTGGCCAGTAAACAGTCCCAAGGCTGAGAGAAAAGACATTCCAAGAGAATGGAGGCACATAGGTCTAAGGATGTGAAAAGACAGGAAGCAGGGAAACATGGATTGGAAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106582790

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1701139 True 216 lncRNA 0.52 1 74929682 74929897

Neighbor

gene id symbol gene type direction distance location
LOC110494570 LOC106565767 coding upstream 1241 74918264 ~ 74928441 (+)
gnl3l gnl3l coding upstream 34219 74877193 ~ 74895463 (+)
LOC100135982 LOC100136940 coding upstream 67915 74858914 ~ 74861767 (+)
LOC110493256 LOC106565770 coding upstream 71370 74854126 ~ 74858312 (+)
opn1sw2 LOC100135984 coding upstream 87607 74839548 ~ 74842075 (+)
cxxc1b LOC106565764 coding downstream 7871 74937768 ~ 74943605 (+)
mbd1b LOC106565762 coding downstream 20801 74950698 ~ 74968199 (+)
ccdc120 LOC106565760 coding downstream 38460 74968357 ~ 74997618 (+)
LOC110494575 LOC106565759 coding downstream 70179 75000076 ~ 75014313 (+)
comtb NA coding downstream 79498 75009395 ~ 75011704 (+)
G1487790 NA non-coding upstream 29998 74899433 ~ 74899684 (+)
G1487778 NA non-coding upstream 54293 74875182 ~ 74875389 (+)
G1487771 NA non-coding upstream 57839 74871620 ~ 74871843 (+)
G1487650 NA non-coding upstream 142336 74787058 ~ 74787346 (+)
G1487644 NA non-coding upstream 156899 74772561 ~ 74772783 (+)
G1487813 NA non-coding downstream 15002 74944899 ~ 74945117 (+)
G1487838 LOC106582872 non-coding downstream 77569 75007466 ~ 75012176 (+)
G1487973 NA non-coding downstream 109100 75038997 ~ 75039259 (+)
G1487979 NA non-coding downstream 113040 75042937 ~ 75043140 (+)
G1488009 NA non-coding downstream 143873 75073770 ~ 75074016 (+)
LOC110493252 LOC106565788 other upstream 520493 74388428 ~ 74432420 (+)
G1486811 NA other upstream 950247 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1647663 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1804326 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1884094 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1753702 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3078393 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3088471 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3259115 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3322732 78252629 ~ 78253308 (+)

Expression


Co-expression Network