G1487813


Basic Information

Item Value
gene id G1487813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74944899 ~ 74945117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1701143
tgaaagatgaactgaggtccacactccagttcAGTCggtagtggtaatgcaccttcaacttggttgccaaccgccatataaagtctgAAGAAGAGGAGGCCTTGAAGGAGGAGATATTACTAGAAATGAATTCGGATTTACCTTTTTAACTGTGGATTCATTGTTGGAgttgaggaccttgtgcatttcaggtaaaataactcaatgtttatatcccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1701143 True 219 lncRNA 0.41 1 74944899 74945117

Neighbor

gene id symbol gene type direction distance location
cxxc1b LOC106565764 coding upstream 1294 74937768 ~ 74943605 (+)
LOC110494570 LOC106565767 coding upstream 16458 74918264 ~ 74928441 (+)
gnl3l gnl3l coding upstream 49436 74877193 ~ 74895463 (+)
LOC100135982 LOC100136940 coding upstream 83132 74858914 ~ 74861767 (+)
LOC110493256 LOC106565770 coding upstream 86587 74854126 ~ 74858312 (+)
mbd1b LOC106565762 coding downstream 5581 74950698 ~ 74968199 (+)
ccdc120 LOC106565760 coding downstream 23240 74968357 ~ 74997618 (+)
LOC110494575 LOC106565759 coding downstream 54959 75000076 ~ 75014313 (+)
comtb NA coding downstream 64278 75009395 ~ 75011704 (+)
grm6b LOC106565758 coding downstream 69751 75014868 ~ 75034468 (+)
G1487809 NA non-coding upstream 15002 74929682 ~ 74929897 (+)
G1487790 NA non-coding upstream 45215 74899433 ~ 74899684 (+)
G1487778 NA non-coding upstream 69510 74875182 ~ 74875389 (+)
G1487771 NA non-coding upstream 73056 74871620 ~ 74871843 (+)
G1487650 NA non-coding upstream 157553 74787058 ~ 74787346 (+)
G1487838 LOC106582872 non-coding downstream 62349 75007466 ~ 75012176 (+)
G1487973 NA non-coding downstream 93880 75038997 ~ 75039259 (+)
G1487979 NA non-coding downstream 97820 75042937 ~ 75043140 (+)
G1488009 NA non-coding downstream 128653 75073770 ~ 75074016 (+)
G1488022 NA non-coding downstream 139754 75084871 ~ 75085268 (+)
LOC110493252 LOC106565788 other upstream 535710 74388428 ~ 74432420 (+)
G1486811 NA other upstream 965464 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1662880 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1819543 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1899311 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1738482 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3063173 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3073251 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3243895 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3307512 78252629 ~ 78253308 (+)

Expression


Co-expression Network