G1487979


Basic Information

Item Value
gene id G1487979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 75042937 ~ 75043140 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1701344
GGAACAGCCTATCACTGGCCAACAGGGAACAGCTGTCGTTGCCATCGAAGCTATCAACCTCCTGACACAGGGCATGCGCCCTCTGTTCAAGGTGGTCCCAGCAGTCCAACTCATGCCCCCGTCCAGGACTGGCAGCAGATGGGCTCTGCCTGCAGTGGCTCTGGCCACGCTTCCTTGGAGGGGTACTGGGCCCAGTAGAGGGAC

Function

NR:

description
PREDICTED: glycosyltransferase 8 domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1701344 True 204 lncRNA 0.61 1 75042937 75043140

Neighbor

gene id symbol gene type direction distance location
grm6b LOC106565758 coding upstream 8469 75014868 ~ 75034468 (+)
LOC110494575 LOC106565759 coding upstream 28624 75000076 ~ 75014313 (+)
comtb NA coding upstream 31233 75009395 ~ 75011704 (+)
ccdc120 LOC106565760 coding upstream 45319 74968357 ~ 74997618 (+)
mbd1b LOC106565762 coding upstream 74738 74950698 ~ 74968199 (+)
mon1a LOC106565757 coding downstream 765 75043905 ~ 75050060 (+)
mst1rb LOC106565756 coding downstream 9738 75052878 ~ 75071428 (+)
LOC110494580 LOC106565755 coding downstream 135866 75179006 ~ 75259755 (+)
arl6ip5a LOC106565746 coding downstream 848467 75891607 ~ 75895493 (+)
mitfa LOC106565743 coding downstream 963043 76006183 ~ 76046166 (+)
G1487973 NA non-coding upstream 3678 75038997 ~ 75039259 (+)
G1487838 LOC106582872 non-coding upstream 30761 75007466 ~ 75012176 (+)
G1487813 NA non-coding upstream 97820 74944899 ~ 74945117 (+)
G1487809 NA non-coding upstream 113040 74929682 ~ 74929897 (+)
G1487790 NA non-coding upstream 143253 74899433 ~ 74899684 (+)
G1488009 NA non-coding downstream 30630 75073770 ~ 75074016 (+)
G1488022 NA non-coding downstream 41731 75084871 ~ 75085268 (+)
G1488023 NA non-coding downstream 42324 75085464 ~ 75085762 (+)
G1488028 NA non-coding downstream 49749 75092889 ~ 75093293 (+)
G1488273 LOC106565754 non-coding downstream 235478 75278618 ~ 75284031 (+)
LOC110493252 LOC106565788 other upstream 633748 74388428 ~ 74432420 (+)
G1486811 NA other upstream 1063502 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1760918 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1917581 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1997349 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1640459 76683599 ~ 76684020 (+)
G1491886 NA other downstream 2965150 78008290 ~ 78008799 (+)
G1491899 NA other downstream 2975228 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3145872 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3209489 78252629 ~ 78253308 (+)

Expression


Co-expression Network