G1488023


Basic Information

Item Value
gene id G1488023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 75085464 ~ 75085762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1701392
ggggtattgtgtgtagattgatgaggaaccatttttttaaatacatttagaataaggctgtaacctaacaatgaAAAAacctgaatactttcagaaggcactgtagtcacatgatttctcaatttgcaataggtttgctaattggttgtgcagccagacgTGTTTGCctttccttttgcctcatccctctcatccaTACAAtatttaaattcctcatcaatcctcAGGGATTAaaccgtttttacagtcattttcttaatgggtgcatgcttattagtaactggaattaACTATTTAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1701392 True 299 lncRNA 0.35 1 75085464 75085762

Neighbor

gene id symbol gene type direction distance location
mst1rb LOC106565756 coding upstream 14036 75052878 ~ 75071428 (+)
mon1a LOC106565757 coding upstream 35404 75043905 ~ 75050060 (+)
grm6b LOC106565758 coding upstream 50996 75014868 ~ 75034468 (+)
LOC110494575 LOC106565759 coding upstream 71151 75000076 ~ 75014313 (+)
LOC110494580 LOC106565755 coding downstream 93244 75179006 ~ 75259755 (+)
arl6ip5a LOC106565746 coding downstream 805845 75891607 ~ 75895493 (+)
mitfa LOC106565743 coding downstream 920421 76006183 ~ 76046166 (+)
zgc:113054 LOC106565741 coding downstream 987301 76073063 ~ 76088669 (+)
LOC110494598 LOC106565734 coding downstream 1373696 76459458 ~ 76463496 (+)
G1488022 NA non-coding upstream 196 75084871 ~ 75085268 (+)
G1488009 NA non-coding upstream 11448 75073770 ~ 75074016 (+)
G1487979 NA non-coding upstream 42324 75042937 ~ 75043140 (+)
G1487973 NA non-coding upstream 46205 75038997 ~ 75039259 (+)
G1487838 LOC106582872 non-coding upstream 73288 75007466 ~ 75012176 (+)
G1488028 NA non-coding downstream 7127 75092889 ~ 75093293 (+)
G1488273 LOC106565754 non-coding downstream 192856 75278618 ~ 75284031 (+)
G1488304 NA non-coding downstream 232057 75317819 ~ 75323092 (+)
G1488305 NA non-coding downstream 232215 75317977 ~ 75322996 (+)
G1488325 NA non-coding downstream 264956 75350718 ~ 75352160 (+)
LOC110493252 LOC106565788 other upstream 676275 74388428 ~ 74432420 (+)
G1486811 NA other upstream 1106029 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1803445 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1960108 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 2039876 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1597837 76683599 ~ 76684020 (+)
G1491886 NA other downstream 2922528 78008290 ~ 78008799 (+)
G1491899 NA other downstream 2932606 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3103250 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3166867 78252629 ~ 78253308 (+)

Expression


Co-expression Network