G1488600


Basic Information

Item Value
gene id G1488600
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 75528585 ~ 75589445 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1701994
GGTTAAATCTTTAAAATTAGTCCTTTGCACATTCATTTTTAGTAACACTGATTTTAAATTCCACATTACTTTTCTGAAAACATGGGTCCCTATACAAAAAAACAATGGCTTAAGCGACATAGTGCTTAAGCGACATAAGTACAACAATACAaatcaataaataataatatatcaAATAAACAGCTGCATTGAGAACAGAAATCTGCGGTGAATGATAAAACAAAGGAAAAAGATAGTGGCTTTGTCACAAGTAGTAAATCAGAACAAAAAAGGTCTTAAAGGGACAAATGGCACACATGACAGGTGTTATAATTACAAGAGGATAAACCTTGATGACAGATGCTAATCATATGTAGTGCAAGACAATGTGGAAATATGATTCATAAACATAACAGCATGATGACATTTTTACATAATACATTTGTTTGGATGAAGAAAAGCAAGTATCCTAAAAGCTTTAAATGGCAGTTTTATATAAGAAAGCAAATACCATAAAATAGTACAAGACAGGACACAATCTTATTTGCAGAAATGATACCGAAAACAAGACCTATACTTGCTCTCAGACAATATACTATCTCTATGAAGTGCATTTAAGACTTTTTATGCAACCTtctgaaagaaataaaacaagtAAAATCAGAAAGGCTAGAACAATGCTTAATCTGTCTGACCAACTGCTATTCTACATGGAGTCATTTTCATATGTGAAGTCCAACAGGTCCCTATTTCATTTAAAagcaaaataatacaaaataaagctCCCATGTGGAAAAAAGTTCTGTCCCTATTAAATAAGACATTACTTTAGGAACAACTTAAATTCACACACCAAGGAGTTTGCATATTAAAGTAGTGATATTGCACAGGATACAAAAATAAGACATTAAATACTGCTTGCTATACCAGTAGTAAATACAAAAAGATGTTTATTTCCATGTATCCCAGTGCCATTTCACGTCGCACTACATCTTCCTGTGTCCGGTACAGCTCTGCTGCAGGGCCGGCGCCAGAACGAATCAGTTGGACAGGCATTTAATTTCTATAGGCGGACCCATTTTTTTCACAGGACCTCTTGCGTGCACGCGCTTGCACACATTTTGTTGGTGGGTGTTATAATAAAGGCCATAGGCAgcttgtgagtttcaagtttgggaaaGCTTACAGTTTATCCCGCCATTTCTACCTATCTGCGTATCAGTTATGATTATTTGTATATGCACAttttgtggaacagtttcattttcATAATAATGTTTTTGTTTCTCAAAATTATTGTTACgtggttaatcataaaaatctgaattaaaatgacacaaatctaaaagttaaaATTCAACCAATGCAAGAGCATCAGCCTCTGCCAAATGGACACATCGATACACTGTGATCCATTGGCGGCTAaagaaatgtataaaataaacatgagctggcgcacatcCAGAAAACTTATTTTGTGTGGAGGTACTGACTAATGGCGAATAAACTATAAAAATATAGAGAGTCACGCCGAAACGttggtgatttacccaataaattactgagagtttatatatggagtgtgcgaCTCCCTTTGTTTTTTTTATAGTTTATAGGCTAAAGAAATTAACACAGAgttcagagatagcctataggccaatgcagcaCCTAGGCCAACAACTTCCATCGTCAACTAAGTAAAATACATAGGCCTAAAGCGACAAATAAAAactgtagaaaatatcctgaaGAAAATTCAGGTTATTTCAATCACATTCATCGCTctactgtacctgcctgcctctctttctatctatctgtcttgacttgctAGTGCAACATTGCATCAACTCAGCAGGTTGGCGTGCTCAGGCGCTCCCTCAACGTTATCAGGGGAGAGAAACCACTCACATGCTCATTGCTCACatggagcactccaaacaaaatACAATGACAAAACTTCTAAAATGATggttatgaaataaaccaaaacttgtttctcacaagtgtagcaggttgtgaactctgtAAACAATGTTTCCACTCTGAGAATGAGAACAGTAAATGACTGCAGAAATTAATGTAACCAAATAACAGAGATTAACAGTACATTTACTAGGCCTACTGGTTACATGTGTAATGGGGAATTTATCAAAATAAATGATCAAAGGGAAAACCATTCACACAATGAATGAGCAAGAATTCACAGGAGACAGCGGAGCatattctggagagctgagtgcatgcattctggagagagacgccCATATCTTCGCCATAACCCTCTGcttcttgtctcaacattttaaattatactcaAGACACAGTATCTTCACACATTTTAGATGTTTTTCCGCTGACAGCCACAATTCAATAATTAGCTAGGCTTATTGCCACGTGCTCTGCCCAAATGGCTGGCTTTCCTAATAGGCACAGGCCTATGCACTTGTGATTTGAAATAATCCACAGCTatctaaaaaaacaaaaaaacaaatgatcctctgtggctaagtcaTGATCTCTGGTAAAGTATTTACTATTATTTTATTTAGACAGAAATCATTATATAATTTTGGCAAAACATCAATTTACTTTAGGGGAAGCTAACAGTACACTGTTTACCCACCAACTTTTCTTTGTAATTCGCAAGTGGCTGAAACTAGAtgtctgtatataatgacgagatgctcatgtctccgccctaacagtGCGAGTCACTGTGGGAATGCAGGCAACAAGCTTAGGTCTGCATATtatgcccatagaaacgcattcaGGACAGATTTGTGGCGAGAGTGAGCCCTCTTGCTTCACCTCTGCCTCTCTGCTGAAACCATTGAGTGAAACAGCACCACTCTGTATTACTacgtgtagcccatgtatctgatgctgtctggccagaAAAAGTATGACATGACATACTCCTTTtgttcagacagcatcagatatatggtctacacatacggagacagaggggcgctgtttcgctcggaTGCTTTATCTGAGATTGATGCGTCTTTGACTTCTCAGTCAAATAAATCATCAATATTTCAAGGAGGAACGGTAGGGTGGACCAGGCCCCCTACAGCCCGCCCATAACGCCGGCCCTGCTCTGCTGTATTTCAAGTTCACCCAGTAAAGGCCATGTAATGAGAATTCACTTACATTTTTACATAGAAAACATTTGGCACAGATCCCAACTGGACTGGAAAAAGGATGGGTTGCCTGGGCATGGCGTGCTGGCGGGGCCCTGACACTCGGCGGTGGCCAGGTGCTCCTCGGCCTCGGCCTCACGGCGGTACGTGGTGAACGCCTTCTTTGTGACCGTGGACGCTTCCACCAGCTGCTCCTTGACCTCCTCCGTCACCGCAgcaaccaccactgtagccacCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106602659

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1701994 True 3372 lncRNA 0.39 2 75528585 75589445

Neighbor

gene id symbol gene type direction distance location
LOC110494580 LOC106565755 coding upstream 268830 75179006 ~ 75259755 (+)
mst1rb LOC106565756 coding upstream 457157 75052878 ~ 75071428 (+)
mon1a LOC106565757 coding upstream 478525 75043905 ~ 75050060 (+)
grm6b LOC106565758 coding upstream 494117 75014868 ~ 75034468 (+)
comtb NA coding upstream 516881 75009395 ~ 75011704 (+)
arl6ip5a LOC106565746 coding downstream 302162 75891607 ~ 75895493 (+)
mitfa LOC106565743 coding downstream 416738 76006183 ~ 76046166 (+)
zgc:113054 LOC106565741 coding downstream 483618 76073063 ~ 76088669 (+)
LOC110494598 LOC106565734 coding downstream 870013 76459458 ~ 76463496 (+)
gxylt2 LOC106565732 coding downstream 1050902 76640347 ~ 76657067 (+)
G1488598 NA non-coding upstream 810 75527314 ~ 75527775 (+)
G1488596 NA non-coding upstream 4502 75523808 ~ 75524083 (+)
G1488591 LOC106565752 non-coding upstream 8711 75516451 ~ 75519874 (+)
G1488590 NA non-coding upstream 12519 75515835 ~ 75516066 (+)
G1488522 NA non-coding upstream 34794 75493563 ~ 75493791 (+)
G1488696 NA non-coding downstream 88247 75677692 ~ 75677918 (+)
G1488697 NA non-coding downstream 88510 75677955 ~ 75678223 (+)
G1488699 NA non-coding downstream 89533 75678978 ~ 75679204 (+)
G1488700 NA non-coding downstream 89840 75679285 ~ 75679704 (+)
G1488701 NA non-coding downstream 90644 75680089 ~ 75680304 (+)
LOC110493252 LOC106565788 other upstream 1119396 74388428 ~ 74432420 (+)
G1486811 NA other upstream 1549150 73978890 ~ 73979435 (+)
G1485819 NA other upstream 2246566 73281260 ~ 73282019 (+)
G1485260 NA other upstream 2403229 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 2482997 73044346 ~ 73049958 (+)
G1490016 NA other downstream 1094154 76683599 ~ 76684020 (+)
G1491886 NA other downstream 2418845 78008290 ~ 78008799 (+)
G1491899 NA other downstream 2428923 78018368 ~ 78019816 (+)
G1491963 NA other downstream 2599567 78189012 ~ 78190290 (+)
G1492003 NA other downstream 2663184 78252629 ~ 78253308 (+)

Expression


Co-expression Network