G1488981


Basic Information

Item Value
gene id G1488981
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 75834656 ~ 75835141 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1702412
gaccataggaaccttgagtacatccgttctgccaaacgacttaatgcgcgtcaggcgcgttgggcgctgtttttcgctcgtttcgagttcgtgatttcttatcgtccgggctctaagaacaccaagcctgatgctttatctcgtctcttcagttcttcagtagcctccactgaccccgaggggattctccctgaggggcgtgttgtcgggttgactgtctggggaattgagaggcaggtaaagcaagcgctcactcacactccgtcgccgcgcgcttgtcctaggaaccttattttcgttcccgttcctactcgtctggccgttcttcagtgggctcactctgccaagttagccggccaccctggcgttcggggtacgcttgcttccattcgccagcgtttttggtggcccacccgggagcatgacacgcgtcgtttcgtggctgcttgttcggtctgcgcgcagactaagtccggtaactcccct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1702412 True 486 lncRNA 0.57 1 75834656 75835141

Neighbor

gene id symbol gene type direction distance location
LOC110494580 LOC106565755 coding upstream 574901 75179006 ~ 75259755 (+)
mst1rb LOC106565756 coding upstream 763228 75052878 ~ 75071428 (+)
mon1a LOC106565757 coding upstream 784596 75043905 ~ 75050060 (+)
grm6b LOC106565758 coding upstream 800188 75014868 ~ 75034468 (+)
comtb NA coding upstream 822952 75009395 ~ 75011704 (+)
arl6ip5a LOC106565746 coding downstream 56466 75891607 ~ 75895493 (+)
mitfa LOC106565743 coding downstream 171042 76006183 ~ 76046166 (+)
zgc:113054 LOC106565741 coding downstream 237922 76073063 ~ 76088669 (+)
LOC110494598 LOC106565734 coding downstream 624317 76459458 ~ 76463496 (+)
gxylt2 LOC106565732 coding downstream 805206 76640347 ~ 76657067 (+)
G1488979 NA non-coding upstream 116 75834275 ~ 75834540 (+)
G1488906 NA non-coding upstream 38891 75788220 ~ 75795765 (+)
G1488821 NA non-coding upstream 121321 75713061 ~ 75713335 (+)
G1488815 NA non-coding upstream 129138 75705185 ~ 75705518 (+)
G1488814 NA non-coding upstream 130852 75703553 ~ 75703804 (+)
G1488986 NA non-coding downstream 5285 75840426 ~ 75840803 (+)
G1489026 NA non-coding downstream 26284 75861425 ~ 75861743 (+)
G1489032 NA non-coding downstream 38064 75873205 ~ 75873439 (+)
G1489073 NA non-coding downstream 113196 75948337 ~ 75988795 (+)
G1489114 NA non-coding downstream 168828 76003969 ~ 76011751 (+)
LOC110493252 LOC106565788 other upstream 1425467 74388428 ~ 74432420 (+)
G1486811 NA other upstream 1855221 73978890 ~ 73979435 (+)
G1485819 NA other upstream 2552637 73281260 ~ 73282019 (+)
G1485260 NA other upstream 2709300 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 2789068 73044346 ~ 73049958 (+)
G1490016 NA other downstream 848458 76683599 ~ 76684020 (+)
G1491886 NA other downstream 2173149 78008290 ~ 78008799 (+)
G1491899 NA other downstream 2183227 78018368 ~ 78019816 (+)
G1491963 NA other downstream 2353871 78189012 ~ 78190290 (+)
G1492003 NA other downstream 2417488 78252629 ~ 78253308 (+)

Expression


Co-expression Network