G1489839


Basic Information

Item Value
gene id G1489839
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76495242 ~ 76495466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1703364
gtaaaggaggtgcagcgtttttTTGGttaggtagcggctcccattacctcactgctgaaggggggcccagtgtgtttgcagtggtcggctgaggcggacagggcttttggtcacctaagggctctgtttacctcggctcccgtgctggcgcaTCCAGATGCCTCTTTGGCGTTCAcggtggaggtggatgcgtctgaGGCTAGGATAGGAGCcatgctctctcag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1703364 True 225 lncRNA 0.58 1 76495242 76495466

Neighbor

gene id symbol gene type direction distance location
LOC110494598 LOC106565734 coding upstream 31746 76459458 ~ 76463496 (+)
zgc:113054 LOC106565741 coding upstream 406573 76073063 ~ 76088669 (+)
mitfa LOC106565743 coding upstream 449076 76006183 ~ 76046166 (+)
arl6ip5a LOC106565746 coding upstream 599749 75891607 ~ 75895493 (+)
LOC110494580 LOC106565755 coding upstream 1235487 75179006 ~ 75259755 (+)
gxylt2 LOC106565732 coding downstream 144881 76640347 ~ 76657067 (+)
LOC110494602 LOC106565731 coding downstream 167978 76663444 ~ 76673208 (+)
LOC110494606 LOC106565729 coding downstream 671409 77166875 ~ 77261192 (+)
LOC110494607 LOC106565728 coding downstream 839819 77335285 ~ 77448701 (+)
LOC110494608 LOC106565727 coding downstream 1057061 77552527 ~ 77771222 (+)
G1489496 NA non-coding upstream 203900 76291130 ~ 76291342 (+)
G1489469 NA non-coding upstream 235776 76259111 ~ 76259466 (+)
G1489389 NA non-coding upstream 351785 76143139 ~ 76143457 (+)
G1489388 NA non-coding upstream 352161 76142424 ~ 76143081 (+)
G1489120 NA non-coding upstream 464425 76011292 ~ 76030817 (+)
G1489842 NA non-coding downstream 4469 76499935 ~ 76500161 (+)
G1489850 NA non-coding downstream 9826 76505292 ~ 76505502 (+)
G1489855 NA non-coding downstream 16273 76511739 ~ 76512013 (+)
G1489859 NA non-coding downstream 17953 76513419 ~ 76513645 (+)
G1489860 NA non-coding downstream 18348 76513814 ~ 76514059 (+)
LOC110493252 LOC106565788 other upstream 2086053 74388428 ~ 74432420 (+)
G1486811 NA other upstream 2515807 73978890 ~ 73979435 (+)
G1485819 NA other upstream 3213223 73281260 ~ 73282019 (+)
G1485260 NA other upstream 3369886 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 3449654 73044346 ~ 73049958 (+)
G1490016 NA other downstream 188133 76683599 ~ 76684020 (+)
G1491886 NA other downstream 1512824 78008290 ~ 78008799 (+)
G1491899 NA other downstream 1522902 78018368 ~ 78019816 (+)
G1491963 NA other downstream 1693546 78189012 ~ 78190290 (+)
G1492003 NA other downstream 1757163 78252629 ~ 78253308 (+)

Expression


Co-expression Network