G1489855


Basic Information

Item Value
gene id G1489855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76511739 ~ 76512013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1703382
atctagtggagagccttcccagaagagtggaggctgttatagcagcaaaggggggaccaactccatattaatacccatgattttgaaatgagatgttcgagcatgtgtccacatacttttggtcatgtagtgtagttcTTGGAAATCTCAGACAAGGACATGCTAATAAGGGACTGGGACCCTGTAATATCATATGATGTACTTATACTGTAATAGGATTTTAATATGAACCTTTTGCATTCACAATATAAGGCTTATTTTAACTACCGTAAAAC

Function

NR:

description
PREDICTED: pyridoxal-dependent decarboxylase domain-containing protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1703382 True 275 lncRNA 0.39 1 76511739 76512013

Neighbor

gene id symbol gene type direction distance location
LOC110494598 LOC106565734 coding upstream 48243 76459458 ~ 76463496 (+)
zgc:113054 LOC106565741 coding upstream 423070 76073063 ~ 76088669 (+)
mitfa LOC106565743 coding upstream 465573 76006183 ~ 76046166 (+)
arl6ip5a LOC106565746 coding upstream 616246 75891607 ~ 75895493 (+)
LOC110494580 LOC106565755 coding upstream 1251984 75179006 ~ 75259755 (+)
gxylt2 LOC106565732 coding downstream 128334 76640347 ~ 76657067 (+)
LOC110494602 LOC106565731 coding downstream 151431 76663444 ~ 76673208 (+)
LOC110494606 LOC106565729 coding downstream 654862 77166875 ~ 77261192 (+)
LOC110494607 LOC106565728 coding downstream 823272 77335285 ~ 77448701 (+)
LOC110494608 LOC106565727 coding downstream 1040514 77552527 ~ 77771222 (+)
G1489850 NA non-coding upstream 6237 76505292 ~ 76505502 (+)
G1489842 NA non-coding upstream 11578 76499935 ~ 76500161 (+)
G1489839 NA non-coding upstream 16273 76495242 ~ 76495466 (+)
G1489496 NA non-coding upstream 220397 76291130 ~ 76291342 (+)
G1489469 NA non-coding upstream 252273 76259111 ~ 76259466 (+)
G1489859 NA non-coding downstream 1406 76513419 ~ 76513645 (+)
G1489860 NA non-coding downstream 1801 76513814 ~ 76514059 (+)
G1489863 NA non-coding downstream 7341 76519354 ~ 76519594 (+)
G1489868 NA non-coding downstream 11404 76523417 ~ 76523654 (+)
G1489875 NA non-coding downstream 22584 76534597 ~ 76535049 (+)
LOC110493252 LOC106565788 other upstream 2102550 74388428 ~ 74432420 (+)
G1486811 NA other upstream 2532304 73978890 ~ 73979435 (+)
G1485819 NA other upstream 3229720 73281260 ~ 73282019 (+)
G1485260 NA other upstream 3386383 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 3466151 73044346 ~ 73049958 (+)
G1490016 NA other downstream 171586 76683599 ~ 76684020 (+)
G1491886 NA other downstream 1496277 78008290 ~ 78008799 (+)
G1491899 NA other downstream 1506355 78018368 ~ 78019816 (+)
G1491963 NA other downstream 1676999 78189012 ~ 78190290 (+)
G1492003 NA other downstream 1740616 78252629 ~ 78253308 (+)

Expression


Co-expression Network