G1489915


Basic Information

Item Value
gene id G1489915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76592022 ~ 76592235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1703452
GGCATATTCTCCACGACGCCCATCTAATGATCATCATCGATATCATCCTCATCAAGATCATCACCAGTATCTGGTTTGACGATCAGCAGAGGGTTTCTGCAAGGACACTGTTCTAGGAATGTCCCTGTGCGGTTAGTAGCTTTGGAAGTAGCAGTATTGACTGTGACTGTAGCAGGCTGTGAAcagtctctctccgcctctccctGTGTTCTGC

Function

NR:

description
protein SHQ1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1703452 True 214 lncRNA 0.49 1 76592022 76592235

Neighbor

gene id symbol gene type direction distance location
LOC110494598 LOC106565734 coding upstream 128526 76459458 ~ 76463496 (+)
zgc:113054 LOC106565741 coding upstream 503353 76073063 ~ 76088669 (+)
mitfa LOC106565743 coding upstream 545856 76006183 ~ 76046166 (+)
arl6ip5a LOC106565746 coding upstream 696529 75891607 ~ 75895493 (+)
LOC110494580 LOC106565755 coding upstream 1332267 75179006 ~ 75259755 (+)
gxylt2 LOC106565732 coding downstream 48112 76640347 ~ 76657067 (+)
LOC110494602 LOC106565731 coding downstream 71209 76663444 ~ 76673208 (+)
LOC110494606 LOC106565729 coding downstream 574640 77166875 ~ 77261192 (+)
LOC110494607 LOC106565728 coding downstream 743050 77335285 ~ 77448701 (+)
LOC110494608 LOC106565727 coding downstream 960292 77552527 ~ 77771222 (+)
G1489914 NA non-coding upstream 15 76591797 ~ 76592007 (+)
G1489905 NA non-coding upstream 16029 76575766 ~ 76575993 (+)
G1489902 NA non-coding upstream 18605 76572864 ~ 76573417 (+)
G1489875 NA non-coding upstream 56973 76534597 ~ 76535049 (+)
G1489868 NA non-coding upstream 68368 76523417 ~ 76523654 (+)
G1489975 NA non-coding downstream 13455 76605690 ~ 76606414 (+)
G1490000 NA non-coding downstream 61949 76654184 ~ 76654433 (+)
G1490023 NA non-coding downstream 100457 76692692 ~ 76693000 (+)
G1490098 NA non-coding downstream 205742 76797977 ~ 76842807 (+)
LOC110493252 LOC106565788 other upstream 2182833 74388428 ~ 74432420 (+)
G1486811 NA other upstream 2612587 73978890 ~ 73979435 (+)
G1485819 NA other upstream 3310003 73281260 ~ 73282019 (+)
G1485260 NA other upstream 3466666 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 3546434 73044346 ~ 73049958 (+)
G1490016 NA other downstream 91364 76683599 ~ 76684020 (+)
G1491886 NA other downstream 1416055 78008290 ~ 78008799 (+)
G1491899 NA other downstream 1426133 78018368 ~ 78019816 (+)
G1491963 NA other downstream 1596777 78189012 ~ 78190290 (+)
G1492003 NA other downstream 1660394 78252629 ~ 78253308 (+)

Expression


Co-expression Network