Gene
RNA
| Item | Value |
|---|---|
| gene id | G1490000 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 76654184 ~ 76654433 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1703541 | True | 250 | lncRNA | 0.47 | 1 | 76654184 | 76654433 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494598 | LOC106565734 | coding | upstream | 190688 | 76459458 ~ 76463496 (+) |
| zgc:113054 | LOC106565741 | coding | upstream | 565515 | 76073063 ~ 76088669 (+) |
| mitfa | LOC106565743 | coding | upstream | 608018 | 76006183 ~ 76046166 (+) |
| arl6ip5a | LOC106565746 | coding | upstream | 758691 | 75891607 ~ 75895493 (+) |
| LOC110494580 | LOC106565755 | coding | upstream | 1394429 | 75179006 ~ 75259755 (+) |
| LOC110494602 | LOC106565731 | coding | downstream | 9011 | 76663444 ~ 76673208 (+) |
| LOC110494606 | LOC106565729 | coding | downstream | 512442 | 77166875 ~ 77261192 (+) |
| LOC110494607 | LOC106565728 | coding | downstream | 680852 | 77335285 ~ 77448701 (+) |
| LOC110494608 | LOC106565727 | coding | downstream | 898094 | 77552527 ~ 77771222 (+) |
| LOC110493259 | NA | coding | downstream | 1359910 | 78014343 ~ 78015218 (+) |
| G1489975 | NA | non-coding | upstream | 47770 | 76605690 ~ 76606414 (+) |
| G1489915 | NA | non-coding | upstream | 61949 | 76592022 ~ 76592235 (+) |
| G1489914 | NA | non-coding | upstream | 62177 | 76591797 ~ 76592007 (+) |
| G1489905 | NA | non-coding | upstream | 78191 | 76575766 ~ 76575993 (+) |
| G1489902 | NA | non-coding | upstream | 80767 | 76572864 ~ 76573417 (+) |
| gxylt2 | LOC106565732 | non-coding | downstream | 2005 | 76640347 ~ 76657067 (+) |
| G1490023 | NA | non-coding | downstream | 38259 | 76692692 ~ 76693000 (+) |
| G1490098 | NA | non-coding | downstream | 143544 | 76797977 ~ 76842807 (+) |
| G1490134 | NA | non-coding | downstream | 191257 | 76845690 ~ 76845956 (+) |
| G1490317 | NA | non-coding | downstream | 224966 | 76879399 ~ 76879637 (+) |
| LOC110493252 | LOC106565788 | other | upstream | 2244995 | 74388428 ~ 74432420 (+) |
| G1486811 | NA | other | upstream | 2674749 | 73978890 ~ 73979435 (+) |
| G1485819 | NA | other | upstream | 3372165 | 73281260 ~ 73282019 (+) |
| G1485260 | NA | other | upstream | 3528828 | 73122826 ~ 73125356 (+) |
| LOC110494525 | LOC106565811 | other | upstream | 3608596 | 73044346 ~ 73049958 (+) |
| G1490016 | NA | other | downstream | 29166 | 76683599 ~ 76684020 (+) |
| G1491886 | NA | other | downstream | 1353857 | 78008290 ~ 78008799 (+) |
| G1491899 | NA | other | downstream | 1363935 | 78018368 ~ 78019816 (+) |
| G1491963 | NA | other | downstream | 1534579 | 78189012 ~ 78190290 (+) |
| G1492003 | NA | other | downstream | 1598196 | 78252629 ~ 78253308 (+) |
