G1490023


Basic Information

Item Value
gene id G1490023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76692692 ~ 76693000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1703564
AGGTCACATTGTTTCAGCAAAGGAACTCAACTcagataaagtgaaataaacagcacctaaactcagcaaaaaaagaaatgtccctttttcaggaccctgttttcaaagataattcgtaaaaatccaaataacctcacagatcttcattgtaaaggcttTAAACACTgtgtcccatgcttgttcaatgaaccataaacaatgaatgaacatgcatctgtggaatggtcgttaagacactaacagcttacaaacggtaggcaattaaggtcacagttatgaaaacttaggacaccaaagaggcctttctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1703564 True 309 lncRNA 0.37 1 76692692 76693000

Neighbor

gene id symbol gene type direction distance location
LOC110494602 LOC106565731 coding upstream 19484 76663444 ~ 76673208 (+)
gxylt2 LOC106565732 coding upstream 35625 76640347 ~ 76657067 (+)
LOC110494598 LOC106565734 coding upstream 229196 76459458 ~ 76463496 (+)
zgc:113054 LOC106565741 coding upstream 604023 76073063 ~ 76088669 (+)
mitfa LOC106565743 coding upstream 646526 76006183 ~ 76046166 (+)
LOC110494606 LOC106565729 coding downstream 473875 77166875 ~ 77261192 (+)
LOC110494607 LOC106565728 coding downstream 642285 77335285 ~ 77448701 (+)
LOC110494608 LOC106565727 coding downstream 859527 77552527 ~ 77771222 (+)
LOC110493259 NA coding downstream 1321343 78014343 ~ 78015218 (+)
LOC110494613 NA coding downstream 1335591 78028591 ~ 78029532 (+)
G1490000 NA non-coding upstream 38259 76654184 ~ 76654433 (+)
G1489975 NA non-coding upstream 86278 76605690 ~ 76606414 (+)
G1489915 NA non-coding upstream 100457 76592022 ~ 76592235 (+)
G1489914 NA non-coding upstream 100685 76591797 ~ 76592007 (+)
G1490098 NA non-coding downstream 104977 76797977 ~ 76842807 (+)
G1490134 NA non-coding downstream 152690 76845690 ~ 76845956 (+)
G1490317 NA non-coding downstream 186399 76879399 ~ 76879637 (+)
G1490320 LOC106586052 non-coding downstream 192545 76885545 ~ 76886318 (+)
G1490341 NA non-coding downstream 210781 76903781 ~ 76904002 (+)
G1490016 NA other upstream 8672 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 2283503 74388428 ~ 74432420 (+)
G1486811 NA other upstream 2713257 73978890 ~ 73979435 (+)
G1485819 NA other upstream 3410673 73281260 ~ 73282019 (+)
G1485260 NA other upstream 3567336 73122826 ~ 73125356 (+)
G1491886 NA other downstream 1315290 78008290 ~ 78008799 (+)
G1491899 NA other downstream 1325368 78018368 ~ 78019816 (+)
G1491963 NA other downstream 1496012 78189012 ~ 78190290 (+)
G1492003 NA other downstream 1559629 78252629 ~ 78253308 (+)
G1492310 NA other downstream 2077747 78770747 ~ 78775727 (+)

Expression


Co-expression Network