G1490317


Basic Information

Item Value
gene id G1490317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76879399 ~ 76879637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1703878
cctccaacccttaagtcacaggggggtcaaatacagacttattttagttttaattggaatgccatcagaggatggactgtttaaagtaagaccggaatggagcccaagcctcattaaacagtttggggttcccacgtgaattgaattgatttttttctagtttcagagagcacaacacatctctcacccaatatttataagatgggggagctgccatcttccagttctgtagtattagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1703878 True 239 lncRNA 0.42 1 76879399 76879637

Neighbor

gene id symbol gene type direction distance location
LOC110494602 LOC106565731 coding upstream 206191 76663444 ~ 76673208 (+)
gxylt2 LOC106565732 coding upstream 222332 76640347 ~ 76657067 (+)
LOC110494598 LOC106565734 coding upstream 415903 76459458 ~ 76463496 (+)
zgc:113054 LOC106565741 coding upstream 790730 76073063 ~ 76088669 (+)
mitfa LOC106565743 coding upstream 833233 76006183 ~ 76046166 (+)
LOC110494606 LOC106565729 coding downstream 287238 77166875 ~ 77261192 (+)
LOC110494607 LOC106565728 coding downstream 455648 77335285 ~ 77448701 (+)
LOC110494608 LOC106565727 coding downstream 672890 77552527 ~ 77771222 (+)
LOC110493259 NA coding downstream 1134706 78014343 ~ 78015218 (+)
LOC110494613 NA coding downstream 1148954 78028591 ~ 78029532 (+)
G1490134 NA non-coding upstream 33443 76845690 ~ 76845956 (+)
G1490098 NA non-coding upstream 36592 76797977 ~ 76842807 (+)
G1490023 NA non-coding upstream 186399 76692692 ~ 76693000 (+)
G1490000 NA non-coding upstream 224966 76654184 ~ 76654433 (+)
G1490320 LOC106586052 non-coding downstream 5908 76885545 ~ 76886318 (+)
G1490341 NA non-coding downstream 24144 76903781 ~ 76904002 (+)
G1490350 NA non-coding downstream 34350 76913987 ~ 76914224 (+)
G1490353 NA non-coding downstream 35320 76914957 ~ 76915190 (+)
G1490357 NA non-coding downstream 37531 76917168 ~ 76917429 (+)
G1490016 NA other upstream 195379 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 2470210 74388428 ~ 74432420 (+)
G1486811 NA other upstream 2899964 73978890 ~ 73979435 (+)
G1485819 NA other upstream 3597380 73281260 ~ 73282019 (+)
G1485260 NA other upstream 3754043 73122826 ~ 73125356 (+)
G1491886 NA other downstream 1128653 78008290 ~ 78008799 (+)
G1491899 NA other downstream 1138731 78018368 ~ 78019816 (+)
G1491963 NA other downstream 1309375 78189012 ~ 78190290 (+)
G1492003 NA other downstream 1372992 78252629 ~ 78253308 (+)
G1492310 NA other downstream 1891110 78770747 ~ 78775727 (+)

Expression


Co-expression Network