XLOC_003402 (BX276115.1)


Basic Information

Item Value
gene id XLOC_003402
gene name BX276115.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 20033066 ~ 20033185 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006668
TCAATTGTatacagctagctctctgcatctcccacatggtcgcccactgaagctaagcatggCTTCGCCCGGTCAGTCCTTGGAtgtgagaccacatgggaaagcttggttgcattagtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100101

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006668 True 120 rRNA 0.52 1 20033066 20033185

Neighbor

gene id symbol gene type direction distance location
XLOC_003400 thoc7 coding upstream 421710 19603251 ~ 19611356 (+)
XLOC_003399 psmd6 coding upstream 521518 19502297 ~ 19511548 (+)
XLOC_003398 prickle2b coding upstream 561308 19271557 ~ 19471758 (+)
XLOC_003397 adamts9 coding upstream 805264 19157879 ~ 19227802 (+)
XLOC_003396 magi1b coding upstream 941299 18873113 ~ 19091767 (+)
XLOC_003403 fezf2 coding downstream 23547 20056732 ~ 20059407 (+)
XLOC_003404 cdh4 coding downstream 337994 20371179 ~ 20826753 (+)
XLOC_003405 NA coding downstream 854925 20888110 ~ 20890881 (+)
XLOC_003406 CABZ01008730.1 coding downstream 862937 20896122 ~ 20906178 (+)
XLOC_003407 NA coding downstream 895056 20928241 ~ 20930324 (+)
XLOC_003369 CR854846.2 misc upstream 3909984 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 7321070 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 7338803 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 7347467 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 7353038 12679732 ~ 12680028 (+)
XLOC_003395 CU207354.2 non-coding upstream 1199820 18832913 ~ 18833246 (+)
XLOC_003394 NA non-coding upstream 1290963 18741027 ~ 18742103 (+)
XLOC_003393 NA non-coding upstream 1325007 18702362 ~ 18708059 (+)
XLOC_003392 BX296530.1 non-coding upstream 1356509 18676442 ~ 18676557 (+)
XLOC_003381 NA non-coding upstream 2069613 17956841 ~ 17963453 (+)
XLOC_003409 CU459075.1 non-coding downstream 1019043 21052228 ~ 21052344 (+)
XLOC_003413 BX321912.1 non-coding downstream 1152284 21185469 ~ 21186684 (+)
XLOC_003414 NA non-coding downstream 1269527 21302712 ~ 21306762 (+)

Expression


Co-expression Network