G1490390


Basic Information

Item Value
gene id G1490390
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76944644 ~ 76944890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1703952
ctccagcaccgcttgccgtgtggtagcagagagaacagtctatgactagggtggctggagtctttgaccatttttagggccttcctctgacaccgcctggtgtagaggtgctggatggcaggaatcttggccccggtgatgtactgggccgtacgcactactctctgtattGCCCTGccgttggaggccgagcagttgccatactatgcagtgatgcaaccggtcaggatgctctagatggtgcagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1703952 True 247 lncRNA 0.57 1 76944644 76944890

Neighbor

gene id symbol gene type direction distance location
LOC110494602 LOC106565731 coding upstream 271436 76663444 ~ 76673208 (+)
gxylt2 LOC106565732 coding upstream 287577 76640347 ~ 76657067 (+)
LOC110494598 LOC106565734 coding upstream 481148 76459458 ~ 76463496 (+)
zgc:113054 LOC106565741 coding upstream 855975 76073063 ~ 76088669 (+)
mitfa LOC106565743 coding upstream 898478 76006183 ~ 76046166 (+)
LOC110494606 LOC106565729 coding downstream 221985 77166875 ~ 77261192 (+)
LOC110494607 LOC106565728 coding downstream 390395 77335285 ~ 77448701 (+)
LOC110494608 LOC106565727 coding downstream 607637 77552527 ~ 77771222 (+)
LOC110493259 NA coding downstream 1069453 78014343 ~ 78015218 (+)
LOC110494613 NA coding downstream 1083701 78028591 ~ 78029532 (+)
G1490371 NA non-coding upstream 15468 76928650 ~ 76929176 (+)
G1490357 NA non-coding upstream 27215 76917168 ~ 76917429 (+)
G1490353 NA non-coding upstream 29454 76914957 ~ 76915190 (+)
G1490350 NA non-coding upstream 30420 76913987 ~ 76914224 (+)
G1490341 NA non-coding upstream 40642 76903781 ~ 76904002 (+)
G1490400 NA non-coding downstream 8100 76952990 ~ 76953204 (+)
G1490412 NA non-coding downstream 17645 76962535 ~ 76963203 (+)
G1490414 NA non-coding downstream 18490 76963380 ~ 77000907 (+)
G1490673 NA non-coding downstream 207070 77151960 ~ 77152418 (+)
G1490843 NA non-coding downstream 326426 77271316 ~ 77271598 (+)
G1490016 NA other upstream 260624 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 2535455 74388428 ~ 74432420 (+)
G1486811 NA other upstream 2965209 73978890 ~ 73979435 (+)
G1485819 NA other upstream 3662625 73281260 ~ 73282019 (+)
G1485260 NA other upstream 3819288 73122826 ~ 73125356 (+)
G1491886 NA other downstream 1063400 78008290 ~ 78008799 (+)
G1491899 NA other downstream 1073478 78018368 ~ 78019816 (+)
G1491963 NA other downstream 1244122 78189012 ~ 78190290 (+)
G1492003 NA other downstream 1307739 78252629 ~ 78253308 (+)
G1492310 NA other downstream 1825857 78770747 ~ 78775727 (+)

Expression


Co-expression Network