G1490412


Basic Information

Item Value
gene id G1490412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 76962535 ~ 76963203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1703974
gtttaaagtggctagtgatacatttttgacatcaatttttccattattaaagtggctggagttgagtcagtatgttgacagCAGCCACTCATTGTtagtggtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatgtaaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacaacatttattggatatttcaaacttttttaacaaatcaaaaactgcaaaattgggcatgcaaaattattcagccccttttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtggagaagtttaaagccggatttggatacaaaaatatttcccaagcttcaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1703974 True 669 lncRNA 0.40 1 76962535 76963203

Neighbor

gene id symbol gene type direction distance location
LOC110494602 LOC106565731 coding upstream 289327 76663444 ~ 76673208 (+)
gxylt2 LOC106565732 coding upstream 305468 76640347 ~ 76657067 (+)
LOC110494598 LOC106565734 coding upstream 499039 76459458 ~ 76463496 (+)
zgc:113054 LOC106565741 coding upstream 873866 76073063 ~ 76088669 (+)
mitfa LOC106565743 coding upstream 916369 76006183 ~ 76046166 (+)
LOC110494606 LOC106565729 coding downstream 203672 77166875 ~ 77261192 (+)
LOC110494607 LOC106565728 coding downstream 372082 77335285 ~ 77448701 (+)
LOC110494608 LOC106565727 coding downstream 589324 77552527 ~ 77771222 (+)
LOC110493259 NA coding downstream 1051140 78014343 ~ 78015218 (+)
LOC110494613 NA coding downstream 1065388 78028591 ~ 78029532 (+)
G1490400 NA non-coding upstream 9331 76952990 ~ 76953204 (+)
G1490390 NA non-coding upstream 17645 76944644 ~ 76944890 (+)
G1490371 NA non-coding upstream 33359 76928650 ~ 76929176 (+)
G1490357 NA non-coding upstream 45106 76917168 ~ 76917429 (+)
G1490353 NA non-coding upstream 47345 76914957 ~ 76915190 (+)
G1490414 NA non-coding downstream 177 76963380 ~ 77000907 (+)
G1490673 NA non-coding downstream 188757 77151960 ~ 77152418 (+)
G1490843 NA non-coding downstream 308113 77271316 ~ 77271598 (+)
G1490863 NA non-coding downstream 328391 77291594 ~ 77291827 (+)
G1490869 LOC106562215 non-coding downstream 329641 77292844 ~ 77293206 (+)
G1490016 NA other upstream 278515 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 2553346 74388428 ~ 74432420 (+)
G1486811 NA other upstream 2983100 73978890 ~ 73979435 (+)
G1485819 NA other upstream 3680516 73281260 ~ 73282019 (+)
G1485260 NA other upstream 3837179 73122826 ~ 73125356 (+)
G1491886 NA other downstream 1045087 78008290 ~ 78008799 (+)
G1491899 NA other downstream 1055165 78018368 ~ 78019816 (+)
G1491963 NA other downstream 1225809 78189012 ~ 78190290 (+)
G1492003 NA other downstream 1289426 78252629 ~ 78253308 (+)
G1492310 NA other downstream 1807544 78770747 ~ 78775727 (+)

Expression


Co-expression Network