G1491201


Basic Information

Item Value
gene id G1491201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 77532199 ~ 77532521 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1704812
gtacaaagagatccttgatgaaaacctgctccagagcgctcaggacctcagactggggcaaaggttcaccttccaacaggacaatgaccctaagcacacagtcaagacaatgcaggagtggcttcgggactagtctctgaatgtccttcagtggcccagccagagcctggacttgaacccgatcgaacatctctggagagacatgaaaattgctgtgcagcgacactccccatccaacctgacagagattgagaggaccTGCaatgaagaatgggagaaactccccaaatacaggtgtgccaagcttgtagcgtcatacccac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1704812 True 323 lncRNA 0.52 1 77532199 77532521

Neighbor

gene id symbol gene type direction distance location
LOC110494605 LOC106565730 coding downstream 444772 77008239 ~ 77087427 (-)
LOC110494603 LOC106582849 coding downstream 696336 76698772 ~ 76835863 (-)
LOC110494599 LOC106565733 coding downstream 960172 76545230 ~ 76572027 (-)
LOC110493258 NA coding downstream 1064596 76464920 ~ 76467603 (-)
LOC110494597 LOC106565735 coding downstream 1103026 76425342 ~ 76429173 (-)
LOC110494609 LOC105017386 coding upstream 238880 77771401 ~ 77956458 (-)
LOC110494610 NA coding upstream 442768 77975289 ~ 77976652 (-)
LOC110495194 NA coding upstream 450882 77983403 ~ 77984480 (-)
LOC118940494 NA coding upstream 457379 77989900 ~ 77990977 (-)
LOC110494611 NA coding upstream 464213 77996734 ~ 77998924 (-)
G1491193 NA non-coding downstream 3132 77528840 ~ 77529067 (-)
G1491167 NA non-coding downstream 18335 77513522 ~ 77513864 (-)
G1491155 NA non-coding downstream 31435 77500482 ~ 77500764 (-)
G1491129 NA non-coding downstream 49017 77482900 ~ 77483182 (-)
G1490901 NA non-coding downstream 217653 77314268 ~ 77314546 (-)
G1491697 NA non-coding upstream 236596 77769117 ~ 77771137 (-)
G1491698 NA non-coding upstream 243566 77776087 ~ 77776608 (-)
G1491709 NA non-coding upstream 263332 77795853 ~ 77886162 (-)
G1491825 NA non-coding upstream 412260 77944781 ~ 77948412 (-)
G1491826 NA non-coding upstream 414494 77947015 ~ 77948755 (-)
G1491128 NA other downstream 49810 77481941 ~ 77482389 (-)
G1490147 NA other downstream 834103 76696796 ~ 76698096 (-)
G1488708 NA other downstream 2006603 75525182 ~ 75525596 (-)
G1488266 NA other downstream 2267976 75263720 ~ 75264223 (-)
G1487872 NA other downstream 2632452 74899391 ~ 74899747 (-)
LOC110493260 NA other upstream 555082 78086079 ~ 78088852 (-)
LOC110494620 LOC106565713 other upstream 682478 78214999 ~ 78389849 (-)
G1492729 NA other upstream 940497 78473018 ~ 78475506 (-)
G1492897 NA other upstream 1238219 78770740 ~ 78771954 (-)
G1492910 NA other upstream 1245831 78778352 ~ 78781395 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006079 CR931802.4 coding NC_007124.7 CM002897.2 31144305 ~ 31191814 (+)