G1491417


Basic Information

Item Value
gene id G1491417
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 77794792 ~ 77868915 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1705033
gaaatattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagacccagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttatgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1705033 True 473 lncRNA 0.44 2 77794792 77868915

Neighbor

gene id symbol gene type direction distance location
LOC110494608 LOC106565727 coding upstream 23570 77552527 ~ 77771222 (+)
LOC110494607 LOC106565728 coding upstream 346091 77335285 ~ 77448701 (+)
LOC110494606 LOC106565729 coding upstream 533600 77166875 ~ 77261192 (+)
LOC110494602 LOC106565731 coding upstream 1121584 76663444 ~ 76673208 (+)
gxylt2 LOC106565732 coding upstream 1137725 76640347 ~ 76657067 (+)
LOC110493259 NA coding downstream 145428 78014343 ~ 78015218 (+)
LOC110494613 NA coding downstream 159676 78028591 ~ 78029532 (+)
lbp/bpi-2 lbp/bpi-2 coding downstream 162572 78031487 ~ 78036695 (+)
tcbp2 tcbp2 coding downstream 182054 78050969 ~ 78053292 (+)
LOC118940495 tcbp2 coding downstream 187410 78056325 ~ 78060810 (+)
G1491200 NA non-coding upstream 262461 77532123 ~ 77532331 (+)
G1491189 NA non-coding upstream 266693 77527847 ~ 77528099 (+)
G1491184 NA non-coding upstream 270554 77523977 ~ 77524238 (+)
G1491168 NA non-coding upstream 280390 77514112 ~ 77514402 (+)
G1491158 NA non-coding upstream 285279 77509204 ~ 77509513 (+)
G1491831 NA non-coding downstream 88688 77957603 ~ 77957806 (+)
G1491885 NA non-coding downstream 139114 78008029 ~ 78008253 (+)
G1491889 NA non-coding downstream 140190 78009105 ~ 78010123 (+)
G1491892 NA non-coding downstream 141671 78010586 ~ 78010787 (+)
G1491925 NA non-coding downstream 217152 78086067 ~ 78086589 (+)
G1490016 NA other upstream 1110772 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 3385603 74388428 ~ 74432420 (+)
G1486811 NA other upstream 3815357 73978890 ~ 73979435 (+)
G1485819 NA other upstream 4512773 73281260 ~ 73282019 (+)
G1485260 NA other upstream 4669436 73122826 ~ 73125356 (+)
G1491886 NA other downstream 139375 78008290 ~ 78008799 (+)
G1491899 NA other downstream 149453 78018368 ~ 78019816 (+)
G1491963 NA other downstream 320097 78189012 ~ 78190290 (+)
G1492003 NA other downstream 383714 78252629 ~ 78253308 (+)
G1492310 NA other downstream 901832 78770747 ~ 78775727 (+)

Expression


Co-expression Network