G1491825


Basic Information

Item Value
gene id G1491825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 77944781 ~ 77948412 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1705478
agaggataggtcaaggagaggatagccagaggacaggtggaggagaggatagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcagaagataggtagaggagagcatagccagaggagaggatagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagccagaggacaggtagaggagaggatagccagaggatagatagaggagaTGATAGCCAGAGGATAGGTACAGGAGGATagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcagaggacaggtagaggagaggatagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcagaagataggtagaggagagcatagccagaggagaggatggccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagccagaggacaggtagaggagaggatagccagaggatagatagaggagaTGATAGCCAGAGGATAGGTACAGGAGACAATAGCCAGAGGATAGGTATAGGAGATGATAGCCAGAGGATAGGTTTAGGAGAGGATAACCAGtggataggtagaggagaggatagccagaggacaggtagagGACAAGATAGCCAGAGGATAGGTTTAGGAGAGGATAACCAGATGATAGGTTTAGGAGAGGATAaccagaggataggtagaggagaggatagccagaggataggtagagTAGTTGATAGCCAGAGGACAGGTTTAGGAGAGGATAaccagaggataggtagaggagaggataaccagaggacaggtagaggagaggatagccagaggataggtagaggagagg
>TU1705479
agaggatagccagaggataggtagagaagaggatagccagaggataggtagaggagaggatagtcagaggataggtagaggatagtcagaggataggtagaggatagtcagaggataggtagaggagaggatagccagaggataggtagaggagaggataaccagaggataggtagaggagaggataaccAGAGGATAGGTCAAGGAGAGGATAGCCAGaggacaggtggaggagaggatagccagaggataggtagaggagatgatagccagaggataggtagaggatatgatagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcaGAGGATAGgtagaggagaggatagtcagaagataggtagaggagagcatagccagaggagaggatggccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagccagaggacaggtagaggagaggatagccagaggatagatagaggagaTGATAGCCAGAGGATAGGTACAGGAGACAATAGCCAGAGGATAGGTATAGGAGATGATAGCCAGAGGATAGGTTTAGGAGAGGATAACCAGtggataggtagaggagaggatagccagaggacaggtagagGACAAGATAGCCAGAGGATAGGTTTAGGAGAGGATAACCAGATGATAGGTTTAGGAGAGGATAaccagaggataggtagaggagaggatagccagaggataggtagagTAGTTGATAGCCAGAGGACAGGTTTAGGAGAGGATAaccagaggataggtagaggagaggataaccagaggacaggtagaggagaggatagccagaggataggtagaggagagg
>TU1705480
agaggatagccagaggataggtagagaagaggatagccagaggataggtagaggagaggatagtcagaggataggtagaggatagtcagaggataggtagaggatagtcagaggataggtagaggagaggatagccagaggataggtagaggagaggataaccagaggatagGTCAAGGAGAGGATAGCCAGaggacaggtggaggagaggatagccagaggataggtagaggagatgatagccagaggataggtagaggatatgatagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcaGAGGATAGgtagaggagaggatagtcagaagataggtagaggagagcatagccagaggagaggatagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagccagaggacaggtagaggagaggatagccagaggatagatagaggagaTGATAGCCAGAGGATAGGTACAGGAGACAATAGCCAGAGGATAGGTATAGGAGATGATAGCCAGAGGATAGGTTTAGGAGAGGATAACCAGtggataggtagaggagaggatagccagaggacaggtagagGACAAGATAGCCAGAGGATAGGTTTAGGAGAGGATAACCAGATGATAGGTTTAGGAGAGGATAaccagaggataggtagaggagaggatagccagaggataggtagagTAGTTGATAGCCAGAGGACAGGTTTAGGAGAGGATAaccagaggataggtagaggagaggataaccagaggacaggtagaggagaggatagccagaggataggtagaggagagg
>TU1705481
agaggataggtcaaggagaggatagccagaggacaggtggaggagaggatagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagtcagaagataggtagaggagagcatagccagaggagaggatagccagaggataggtagaggagaggatagtcagaggataggtagaggagaggatagccagaggacaggtagaggagaggataaccagaggacaggtagaggagaggatagccagaggataggtagaggagagg

Function

NR:

description
PREDICTED: glutamate-rich protein 6B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1705478 False 969 lncRNA 0.50 2 77944781 77948412
TU1705479 False 875 lncRNA 0.49 2 77944781 77946897
TU1705480 False 848 lncRNA 0.49 4 77944781 77946897
TU1705481 True 307 lncRNA 0.51 3 77944781 77948412

Neighbor

gene id symbol gene type direction distance location
LOC110494605 LOC106565730 coding downstream 857354 77008239 ~ 77087427 (-)
LOC110494603 LOC106582849 coding downstream 1108918 76698772 ~ 76835863 (-)
LOC110494599 LOC106565733 coding downstream 1372754 76545230 ~ 76572027 (-)
LOC110493258 NA coding downstream 1477178 76464920 ~ 76467603 (-)
LOC110494597 LOC106565735 coding downstream 1515608 76425342 ~ 76429173 (-)
LOC110494610 NA coding upstream 26877 77975289 ~ 77976652 (-)
LOC110495194 NA coding upstream 34991 77983403 ~ 77984480 (-)
LOC118940494 NA coding upstream 41488 77989900 ~ 77990977 (-)
LOC110494611 NA coding upstream 48322 77996734 ~ 77998924 (-)
LOC110494612 LOC106582968 coding upstream 48322 77996734 ~ 78007395 (-)
G1491709 NA non-coding downstream 58619 77795853 ~ 77886162 (-)
G1491698 NA non-coding downstream 168173 77776087 ~ 77776608 (-)
G1491697 NA non-coding downstream 173644 77769117 ~ 77771137 (-)
G1491201 NA non-coding downstream 412260 77532199 ~ 77532521 (-)
G1491193 NA non-coding downstream 415714 77528840 ~ 77529067 (-)
G1491832 NA non-coding upstream 9654 77958066 ~ 77958287 (-)
G1491870 NA non-coding upstream 35027 77983439 ~ 77990936 (-)
G1491887 NA non-coding upstream 59644 78008056 ~ 78008293 (-)
G1491128 NA other downstream 462392 77481941 ~ 77482389 (-)
G1490147 NA other downstream 1246685 76696796 ~ 76698096 (-)
G1488708 NA other downstream 2419185 75525182 ~ 75525596 (-)
G1488266 NA other downstream 2680558 75263720 ~ 75264223 (-)
G1487872 NA other downstream 3045034 74899391 ~ 74899747 (-)
LOC110493260 NA other upstream 139191 78086079 ~ 78088852 (-)
LOC110494620 LOC106565713 other upstream 266587 78214999 ~ 78389849 (-)
G1492729 NA other upstream 524606 78473018 ~ 78475506 (-)
G1492897 NA other upstream 822328 78770740 ~ 78771954 (-)
G1492910 NA other upstream 829940 78778352 ~ 78781395 (-)

Expression


Co-expression Network