G1491899


Basic Information

Item Value
gene id G1491899
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78018368 ~ 78019816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1705568
AGACCAGTACAGCACAGAGATCCAGCCATGGCACCAACAATCACTTCAGCTATGATCTACTCTAATGAGCACCTGACTCTGACAAGCCATTGATGGAGAAGTTACACAGATATCGTATCAACAACAGCATCGAGCAGCTCAAGTCTCTCCTGGGTCCAGAGATCCTCAACCAGCAGTCGGACTCCAAGCTGGAGATAGCCGACATCCAGGATTTGCCAGTTTTCTTGCTGAGACAACAGCAACAGAACCAGCTAGTTAGCTCCTCCTCCTGCTCAGCAGCTGTCAATCAGGGTTACTCCAGTTGTGTCCAAGAGATTGTGCACTTCCTGACCAAGGATGAGGTGAAGACACAGACCCAGAGATAACTGCTGAGCCACTTCCAGAGCCTGCATCCATCCTCTGATAAGAACAGGAGGGAGAGTGACCTGCCTCAGTTCAGCTCCCAGCCCAGTACAGCACCAGCAAAGAGAAGAGTCCAGTCCACACTGCTCTCTGGAGGCCCTGGTAGAGTCCTACAGACTGGAACTCCACTCTCAAACAAACTCAATGCACCATGTTAGTCTAACATTAATGTGATGGACAGTGATCAGAGATCTTCTTCATATTCTGCTTGTGCAGGTTGTTTTAAAAGTCTTGCTGTTATTAAGACTTATTTTCTGTTGTACTGAACAAGTTGTAATGTTTTTCTAAGAAAATGGTCAAATTGATCATTGAATAATAACATTTAAAACGTGTTGATATTGATCATATGTTCGTTCATGATCAACATGATCAGCATCAACTTCTATGGTCCTCCATGAGAACTTTTCCCGCAAAATAGGTGTTATATGATCAATCTGTTTGTGATGTTCTATGATTGATCTGTTTTAAGGTGAAAAGGTATAAGACAACAATGTTTTACAACAGTGATATGTCATTATTGACATTGTATTGAGCATGTTCTGTGTCGCATGTATCAGTTATATATGTGATCATGTTCAACCTGAGCTACAACATCAATGGTCCTCCATGAGGACTTTGAACCCAAAATGTTGTTACAAACACAATGTTGTAATGATATGGTCATATTAACATTATATTGAGCATCTTCTGTGAGGTATGTATCAGTATCAGTTAAACATTTGTTATTGATCAACTAGAGCTCCAGAATCACTGATTCTCCATGATGATTATTTACCCAAACTGGGAATTGTACCTGTTATCATCACTCTGTGATTAGAACTAATTGATTTGTTTAAAGATCAGACTTTAAGTGTGAAAATGTTGCTCACGCTGTTTGAATGATGTGGATATTGTAAAGGtgagaaaatgttttattttaatgtGAAACCCTTATTA

Function

NR:

description
transcription factor HES-5-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1705568 True 1338 TUCP 0.40 2 78018368 78019816

Neighbor

gene id symbol gene type direction distance location
LOC110493259 NA coding upstream 3150 78014343 ~ 78015218 (+)
LOC110494608 LOC106565727 coding upstream 247146 77552527 ~ 77771222 (+)
LOC110494607 LOC106565728 coding upstream 569667 77335285 ~ 77448701 (+)
LOC110494606 LOC106565729 coding upstream 757176 77166875 ~ 77261192 (+)
LOC110494602 LOC106565731 coding upstream 1345160 76663444 ~ 76673208 (+)
LOC110494613 NA coding downstream 8775 78028591 ~ 78029532 (+)
lbp/bpi-2 lbp/bpi-2 coding downstream 11671 78031487 ~ 78036695 (+)
tcbp2 tcbp2 coding downstream 31153 78050969 ~ 78053292 (+)
LOC118940495 tcbp2 coding downstream 36509 78056325 ~ 78060810 (+)
si:ch73-303b9.1 LOC106565721 coding downstream 64906 78084722 ~ 78085995 (+)
G1491892 NA non-coding upstream 7581 78010586 ~ 78010787 (+)
G1491889 NA non-coding upstream 8245 78009105 ~ 78010123 (+)
G1491885 NA non-coding upstream 10115 78008029 ~ 78008253 (+)
G1491831 NA non-coding upstream 60562 77957603 ~ 77957806 (+)
G1491417 NA non-coding upstream 149453 77794792 ~ 77868915 (+)
G1491925 NA non-coding downstream 66251 78086067 ~ 78086589 (+)
G1491928 NA non-coding downstream 70363 78090179 ~ 78090496 (+)
G1491939 NA non-coding downstream 102513 78122329 ~ 78122539 (+)
G1491941 NA non-coding downstream 104410 78124226 ~ 78125219 (+)
G1491947 NA non-coding downstream 113372 78133188 ~ 78133414 (+)
G1491886 NA other upstream 9569 78008290 ~ 78008799 (+)
G1490016 NA other upstream 1334348 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 3609179 74388428 ~ 74432420 (+)
G1486811 NA other upstream 4038933 73978890 ~ 73979435 (+)
G1485819 NA other upstream 4736349 73281260 ~ 73282019 (+)
G1491963 NA other downstream 169196 78189012 ~ 78190290 (+)
G1492003 NA other downstream 232813 78252629 ~ 78253308 (+)
G1492310 NA other downstream 750931 78770747 ~ 78775727 (+)
LOC110493267 LOC106565976 other downstream 1309803 79321093 ~ 79336076 (+)
tusc2 tusc2 other downstream 1362829 79382417 ~ 79387551 (+)

Expression


Co-expression Network