Gene
RNA
| Item | Value |
|---|---|
| gene id | G1491947 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 78133188 ~ 78133414 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1705636 | True | 227 | lncRNA | 0.44 | 1 | 78133188 | 78133414 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch73-303b9.1 | LOC106565721 | coding | upstream | 47193 | 78084722 ~ 78085995 (+) |
| LOC118940495 | tcbp2 | coding | upstream | 72378 | 78056325 ~ 78060810 (+) |
| tcbp2 | tcbp2 | coding | upstream | 79896 | 78050969 ~ 78053292 (+) |
| lbp/bpi-2 | lbp/bpi-2 | coding | upstream | 96493 | 78031487 ~ 78036695 (+) |
| LOC110494613 | NA | coding | upstream | 103656 | 78028591 ~ 78029532 (+) |
| LOC110494621 | LOC105017400 | coding | downstream | 257491 | 78390905 ~ 78395729 (+) |
| odad1 | LOC106565714 | coding | downstream | 262822 | 78396236 ~ 78412856 (+) |
| LOC110494624 | LOC106565712 | coding | downstream | 289573 | 78422987 ~ 78425996 (+) |
| LOC110494627 | LOC106565937 | coding | downstream | 409037 | 78542451 ~ 78553518 (+) |
| LOC110494628 | LOC106565709 | coding | downstream | 421189 | 78554603 ~ 78576168 (+) |
| G1491941 | NA | non-coding | upstream | 7969 | 78124226 ~ 78125219 (+) |
| G1491939 | NA | non-coding | upstream | 10649 | 78122329 ~ 78122539 (+) |
| G1491928 | NA | non-coding | upstream | 42692 | 78090179 ~ 78090496 (+) |
| G1491925 | NA | non-coding | upstream | 46599 | 78086067 ~ 78086589 (+) |
| G1491892 | NA | non-coding | upstream | 122401 | 78010586 ~ 78010787 (+) |
| G1491948 | NA | non-coding | downstream | 159 | 78133573 ~ 78133838 (+) |
| G1491970 | NA | non-coding | downstream | 42209 | 78175623 ~ 78175845 (+) |
| G1491972 | NA | non-coding | downstream | 44280 | 78177694 ~ 78177901 (+) |
| G1491965 | LOC106565716 | non-coding | downstream | 51622 | 78185036 ~ 78186007 (+) |
| G1491966 | NA | non-coding | downstream | 52675 | 78186089 ~ 78187119 (+) |
| G1491899 | NA | other | upstream | 113372 | 78018368 ~ 78019816 (+) |
| G1491886 | NA | other | upstream | 124389 | 78008290 ~ 78008799 (+) |
| G1490016 | NA | other | upstream | 1449168 | 76683599 ~ 76684020 (+) |
| LOC110493252 | LOC106565788 | other | upstream | 3723999 | 74388428 ~ 74432420 (+) |
| G1486811 | NA | other | upstream | 4153753 | 73978890 ~ 73979435 (+) |
| G1491963 | NA | other | downstream | 55598 | 78189012 ~ 78190290 (+) |
| G1492003 | NA | other | downstream | 119215 | 78252629 ~ 78253308 (+) |
| G1492310 | NA | other | downstream | 637333 | 78770747 ~ 78775727 (+) |
| LOC110493267 | LOC106565976 | other | downstream | 1196205 | 79321093 ~ 79336076 (+) |
| tusc2 | tusc2 | other | downstream | 1249231 | 79382417 ~ 79387551 (+) |
