G1491948


Basic Information

Item Value
gene id G1491948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78133573 ~ 78133838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1705637
CTTCAGGAATATCATCTGCATCCACTTCATGGCAACCCAAGAGATAACCTCTTTAAGAGGCGCCCTGCTATAAAAATccatacacaaaacacacaaaacattcCATACGCAAAACATTCCATACGCAAAACATTCCATACGCAAAACATTCCATACGCAAAACATTCCATACGCAAAACATTCCATACGCAAAACATTCCATACGCAAAACATTCCATACGCAAAACATTCCATACGCAAAACATTTCATACGCAAAACATTCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1705637 True 266 lncRNA 0.38 1 78133573 78133838

Neighbor

gene id symbol gene type direction distance location
si:ch73-303b9.1 LOC106565721 coding upstream 47578 78084722 ~ 78085995 (+)
LOC118940495 tcbp2 coding upstream 72763 78056325 ~ 78060810 (+)
tcbp2 tcbp2 coding upstream 80281 78050969 ~ 78053292 (+)
lbp/bpi-2 lbp/bpi-2 coding upstream 96878 78031487 ~ 78036695 (+)
LOC110494613 NA coding upstream 104041 78028591 ~ 78029532 (+)
LOC110494621 LOC105017400 coding downstream 257067 78390905 ~ 78395729 (+)
odad1 LOC106565714 coding downstream 262398 78396236 ~ 78412856 (+)
LOC110494624 LOC106565712 coding downstream 289149 78422987 ~ 78425996 (+)
LOC110494627 LOC106565937 coding downstream 408613 78542451 ~ 78553518 (+)
LOC110494628 LOC106565709 coding downstream 420765 78554603 ~ 78576168 (+)
G1491947 NA non-coding upstream 159 78133188 ~ 78133414 (+)
G1491941 NA non-coding upstream 8354 78124226 ~ 78125219 (+)
G1491939 NA non-coding upstream 11034 78122329 ~ 78122539 (+)
G1491928 NA non-coding upstream 43077 78090179 ~ 78090496 (+)
G1491925 NA non-coding upstream 46984 78086067 ~ 78086589 (+)
G1491970 NA non-coding downstream 41785 78175623 ~ 78175845 (+)
G1491972 NA non-coding downstream 43856 78177694 ~ 78177901 (+)
G1491965 LOC106565716 non-coding downstream 51198 78185036 ~ 78186007 (+)
G1491966 NA non-coding downstream 52251 78186089 ~ 78187119 (+)
G1491963 NA non-coding downstream 55174 78189012 ~ 78190290 (+)
G1491899 NA other upstream 113757 78018368 ~ 78019816 (+)
G1491886 NA other upstream 124774 78008290 ~ 78008799 (+)
G1490016 NA other upstream 1449553 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 3724384 74388428 ~ 74432420 (+)
G1486811 NA other upstream 4154138 73978890 ~ 73979435 (+)
G1492003 NA other downstream 118791 78252629 ~ 78253308 (+)
G1492310 NA other downstream 636909 78770747 ~ 78775727 (+)
LOC110493267 LOC106565976 other downstream 1195781 79321093 ~ 79336076 (+)
tusc2 tusc2 other downstream 1248807 79382417 ~ 79387551 (+)

Expression


Co-expression Network