G1491972


Basic Information

Item Value
gene id G1491972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78177694 ~ 78177901 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1705698
ggagagaaagagagagaaaacaggagagaaagaacaggagagagagaacaggagagaaagagagagaaaacaggagagagcgagagaacaggagagagcgagagaacaggagagaaagaacaggagagagagagagaacaggagagaaagagagagaaaacaggagagagcgagagaacaggagagagcgagagaataggATAGCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1705698 True 208 lncRNA 0.48 1 78177694 78177901

Neighbor

gene id symbol gene type direction distance location
si:ch73-303b9.1 LOC106565721 coding upstream 91699 78084722 ~ 78085995 (+)
LOC118940495 tcbp2 coding upstream 116884 78056325 ~ 78060810 (+)
tcbp2 tcbp2 coding upstream 124402 78050969 ~ 78053292 (+)
lbp/bpi-2 lbp/bpi-2 coding upstream 140999 78031487 ~ 78036695 (+)
LOC110494613 NA coding upstream 148162 78028591 ~ 78029532 (+)
LOC110494621 LOC105017400 coding downstream 213004 78390905 ~ 78395729 (+)
odad1 LOC106565714 coding downstream 218335 78396236 ~ 78412856 (+)
LOC110494624 LOC106565712 coding downstream 245086 78422987 ~ 78425996 (+)
LOC110494627 LOC106565937 coding downstream 364550 78542451 ~ 78553518 (+)
LOC110494628 LOC106565709 coding downstream 376702 78554603 ~ 78576168 (+)
G1491970 NA non-coding upstream 1849 78175623 ~ 78175845 (+)
G1491948 NA non-coding upstream 43856 78133573 ~ 78133838 (+)
G1491947 NA non-coding upstream 44280 78133188 ~ 78133414 (+)
G1491941 NA non-coding upstream 52475 78124226 ~ 78125219 (+)
G1491939 NA non-coding upstream 55155 78122329 ~ 78122539 (+)
G1491965 LOC106565716 non-coding downstream 7135 78185036 ~ 78186007 (+)
G1491966 NA non-coding downstream 8188 78186089 ~ 78187119 (+)
G1491963 NA non-coding downstream 11111 78189012 ~ 78190290 (+)
G1491976 NA non-coding downstream 13699 78191600 ~ 78193502 (+)
G1491977 NA non-coding downstream 15712 78193613 ~ 78246889 (+)
G1491899 NA other upstream 157878 78018368 ~ 78019816 (+)
G1491886 NA other upstream 168895 78008290 ~ 78008799 (+)
G1490016 NA other upstream 1493674 76683599 ~ 76684020 (+)
LOC110493252 LOC106565788 other upstream 3768505 74388428 ~ 74432420 (+)
G1486811 NA other upstream 4198259 73978890 ~ 73979435 (+)
G1492003 NA other downstream 74728 78252629 ~ 78253308 (+)
G1492310 NA other downstream 592846 78770747 ~ 78775727 (+)
LOC110493267 LOC106565976 other downstream 1151718 79321093 ~ 79336076 (+)
tusc2 tusc2 other downstream 1204744 79382417 ~ 79387551 (+)

Expression


Co-expression Network