G1492083


Basic Information

Item Value
gene id G1492083
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78386899 ~ 78387434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1705832
CAAGCCTTTGTGGAAAGGATAGCCTACATGAGCGCAAAGAGCAGCATGTTTAACAATATAAACTTGTTATAAAAGTATTACCTTTAACTTGAGTTTCATATTCGGCTACGATCTCCTTGTCCTTTCGGAATTTGGCCGGAGACGTCATGGCTGGTTCTTCTACTCAAAAACACTAGACTTCGCAATACTGGGTTAAAGAAGTAATCAGGAAAAAAAAGAGTAACTATGATATTTCGTCTGGAAGAATACCCCACTGAAAGATTGTAGCGAGTAACCCCCACAGCCCGTGGAATGGTATTGTGTTCTGCCCCTTCACTCTGCCCGCATTGTGAGAGTTTGGCGCTGCCGCATTCCCATTCGTTTGGATCCTTTCCTTAATGTGTCCTCAAAACCAGTTACAGAGCAAACGGAGGATATATGCATTCCCTCCAAACCAACAATAACCAACGAGTCAGCAAGGTCGGATGAGGAGACTCCTAAAAAGTTTAGTCCTTCAGTAAGTGGCTGTCACCACGACGGTCAGAGGCTGGGCTGGC
>TU1705831
TTTAACTTGAGTTTCATATTCGGCTACGATCTCCTTGTCCTTTCGGAATTTGGCCGGAGACGTCATGGCTGGTTCTTCTACTCAAAAACACTAGACTTCGCAATACTGGGTTAAAGAAGTAATCAGGAAAAAAAAGAGTAACTATGATATTTCGTCTGGAAGAATACCCCACTGAAAGATTGTAGCGAGTAACCCCCACAGCCCGTGGAATGGTATTGTGTTCTGCCCCTTCACTCTGCCCGCATTGTGAGAGTTTGGCGCTGCCGCATTCCCATTCGTTTGGATCCTTTCCTTAATGTGTCCTCAAAACCAGTTACAGAGCAAACGGAGGATATATGCATTCCCTCCAAACCAACAATAACCAACGAGTCAGCAAGGTCGGATGAGGAGACTCCTAAAAAGTTTAGTCCTTCAGTAAGTGGCTGTCACCACGACGGTCAGAGGCTGGGCTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1705832 False 536 lncRNA 0.45 1 78386899 78387434
TU1705831 True 454 lncRNA 0.46 1 78386981 78387434

Neighbor

gene id symbol gene type direction distance location
si:ch73-303b9.1 LOC106565721 coding upstream 300904 78084722 ~ 78085995 (+)
LOC118940495 tcbp2 coding upstream 326089 78056325 ~ 78060810 (+)
tcbp2 tcbp2 coding upstream 333607 78050969 ~ 78053292 (+)
lbp/bpi-2 lbp/bpi-2 coding upstream 350204 78031487 ~ 78036695 (+)
LOC110494613 NA coding upstream 357367 78028591 ~ 78029532 (+)
LOC110494621 LOC105017400 coding downstream 3471 78390905 ~ 78395729 (+)
odad1 LOC106565714 coding downstream 8802 78396236 ~ 78412856 (+)
LOC110494624 LOC106565712 coding downstream 35553 78422987 ~ 78425996 (+)
LOC110494627 LOC106565937 coding downstream 155017 78542451 ~ 78553518 (+)
LOC110494628 LOC106565709 coding downstream 167169 78554603 ~ 78576168 (+)
G1492080 NA non-coding upstream 3854 78382816 ~ 78383045 (+)
G1492009 NA non-coding upstream 125569 78261121 ~ 78261330 (+)
G1492007 LOC106565713 non-coding upstream 128611 78258033 ~ 78258288 (+)
G1492005 NA non-coding upstream 131552 78255136 ~ 78255347 (+)
G1492002 LOC106565713 non-coding upstream 135437 78251244 ~ 78251462 (+)
G1492099 NA non-coding downstream 46616 78434050 ~ 78434317 (+)
G1492106 NA non-coding downstream 53344 78440778 ~ 78440987 (+)
G1492125 NA non-coding downstream 93346 78480780 ~ 78483600 (+)
G1492219 NA non-coding downstream 237284 78624718 ~ 78630403 (+)
G1492003 NA other upstream 133591 78252629 ~ 78253308 (+)
G1491963 NA other upstream 196609 78189012 ~ 78190290 (+)
G1491899 NA other upstream 367083 78018368 ~ 78019816 (+)
G1491886 NA other upstream 378100 78008290 ~ 78008799 (+)
G1490016 NA other upstream 1702879 76683599 ~ 76684020 (+)
G1492310 NA other downstream 383313 78770747 ~ 78775727 (+)
LOC110493267 LOC106565976 other downstream 942185 79321093 ~ 79336076 (+)
tusc2 tusc2 other downstream 995211 79382417 ~ 79387551 (+)
G1495346 NA other downstream 2906006 81293440 ~ 81293926 (+)
G1495362 NA other downstream 2949583 81337017 ~ 81338163 (+)

Expression


Co-expression Network