G1492099


Basic Information

Item Value
gene id G1492099
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78434050 ~ 78434317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1705850
tctttcatttttgttcattgatttcacctgtgttagttactcacctggtctcatcagctccttatttagttcagttcattctgtttgtgcctttgtgaggtattgttcgttttgactctactaagccttttcctagctcgtttgtgagaaccagttatagccttcagtcctagttttgattcacctgcctgtttgcctacctgtgtatgaccattgcctgcctgtgaccacgattctTGCCTTCTGCTAAGGTGAAATAAACACCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1705850 True 268 lncRNA 0.42 1 78434050 78434317

Neighbor

gene id symbol gene type direction distance location
LOC110494624 LOC106565712 coding upstream 8054 78422987 ~ 78425996 (+)
odad1 LOC106565714 coding upstream 21217 78396236 ~ 78412856 (+)
LOC110494621 LOC105017400 coding upstream 38321 78390905 ~ 78395729 (+)
si:ch73-303b9.1 LOC106565721 coding upstream 348055 78084722 ~ 78085995 (+)
LOC118940495 tcbp2 coding upstream 373240 78056325 ~ 78060810 (+)
LOC110494627 LOC106565937 coding downstream 108134 78542451 ~ 78553518 (+)
LOC110494628 LOC106565709 coding downstream 120286 78554603 ~ 78576168 (+)
LOC110494629 LOC106565708 coding downstream 162823 78597140 ~ 78640882 (+)
LOC110494631 LOC106582819 coding downstream 219274 78653591 ~ 78669747 (+)
LOC110494632 LOC106565705 coding downstream 240060 78674377 ~ 78681299 (+)
G1492083 NA non-coding upstream 46616 78386899 ~ 78387434 (+)
G1492080 NA non-coding upstream 51005 78382816 ~ 78383045 (+)
G1492009 NA non-coding upstream 172720 78261121 ~ 78261330 (+)
G1492007 LOC106565713 non-coding upstream 175762 78258033 ~ 78258288 (+)
G1492106 NA non-coding downstream 6461 78440778 ~ 78440987 (+)
G1492125 NA non-coding downstream 46463 78480780 ~ 78483600 (+)
G1492219 NA non-coding downstream 190401 78624718 ~ 78630403 (+)
G1492239 NA non-coding downstream 218792 78653109 ~ 78653334 (+)
G1492193 NA non-coding downstream 238560 78672877 ~ 78673046 (+)
G1492003 NA other upstream 180742 78252629 ~ 78253308 (+)
G1491963 NA other upstream 243760 78189012 ~ 78190290 (+)
G1491899 NA other upstream 414234 78018368 ~ 78019816 (+)
G1491886 NA other upstream 425251 78008290 ~ 78008799 (+)
G1490016 NA other upstream 1750030 76683599 ~ 76684020 (+)
G1492310 NA other downstream 336430 78770747 ~ 78775727 (+)
LOC110493267 LOC106565976 other downstream 895302 79321093 ~ 79336076 (+)
tusc2 tusc2 other downstream 948328 79382417 ~ 79387551 (+)
G1495346 NA other downstream 2859123 81293440 ~ 81293926 (+)
G1495362 NA other downstream 2902700 81337017 ~ 81338163 (+)

Expression


Co-expression Network