G1492249


Basic Information

Item Value
gene id G1492249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78683056 ~ 78683313 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1706019
TGACACTTGGAGGCATCCAATTTAGCAGCCTCATCTGCCATGGCGTTACCCATACTCACAAAATCTTTCCCCCCCAGTGTGAGCAGCAATAGCCAAAGCAGAGGGCAGCATCATAGCCTCCAAGAGATCTAAAACCATAGTTCTATTATGAATAGGACTTCCACAAGCATTGTtaaaacccctactcctccagacacaacaccaggagagacaaacccctattGCAGAATCAGAGAAAATTGTAACCATTTTCCCTTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC108876640

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1706019 True 258 lncRNA 0.45 1 78683056 78683313

Neighbor

gene id symbol gene type direction distance location
LOC110494632 LOC106565705 coding upstream 1757 78674377 ~ 78681299 (+)
LOC110494631 LOC106582819 coding upstream 13309 78653591 ~ 78669747 (+)
LOC110494629 LOC106565708 coding upstream 42174 78597140 ~ 78640882 (+)
LOC110494628 LOC106565709 coding upstream 106888 78554603 ~ 78576168 (+)
LOC110494627 LOC106565937 coding upstream 129538 78542451 ~ 78553518 (+)
LOC110494635 LOC106565704 coding downstream 36075 78719388 ~ 78728997 (+)
LOC110494637 LOC106565962 coding downstream 64525 78747838 ~ 78914408 (+)
LOC110493265 LOC106565960 coding downstream 239361 78922674 ~ 78932811 (+)
LOC110494640 LOC102295370 coding downstream 269775 78953088 ~ 79199957 (+)
LOC110494641 LOC106565967 coding downstream 518088 79201401 ~ 79216532 (+)
G1492194 NA non-coding upstream 9505 78673158 ~ 78673551 (+)
G1492193 NA non-coding upstream 10010 78672877 ~ 78673046 (+)
G1492239 NA non-coding upstream 29722 78653109 ~ 78653334 (+)
G1492219 NA non-coding upstream 52653 78624718 ~ 78630403 (+)
G1492125 NA non-coding upstream 199456 78480780 ~ 78483600 (+)
G1492250 NA non-coding downstream 150 78683463 ~ 78683929 (+)
G1492251 NA non-coding downstream 632 78683945 ~ 78684157 (+)
G1492295 NA non-coding downstream 61942 78745255 ~ 78745616 (+)
G1492308 NA non-coding downstream 62947 78746260 ~ 78746537 (+)
G1492003 NA other upstream 429748 78252629 ~ 78253308 (+)
G1491963 NA other upstream 492766 78189012 ~ 78190290 (+)
G1491899 NA other upstream 663240 78018368 ~ 78019816 (+)
G1491886 NA other upstream 674257 78008290 ~ 78008799 (+)
G1490016 NA other upstream 1999036 76683599 ~ 76684020 (+)
G1492310 NA other downstream 87434 78770747 ~ 78775727 (+)
LOC110493267 LOC106565976 other downstream 646306 79321093 ~ 79336076 (+)
tusc2 tusc2 other downstream 699332 79382417 ~ 79387551 (+)
G1495346 NA other downstream 2610127 81293440 ~ 81293926 (+)
G1495362 NA other downstream 2653704 81337017 ~ 81338163 (+)

Expression


Co-expression Network