G1492295


Basic Information

Item Value
gene id G1492295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78745255 ~ 78745616 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1706068
ccgcacagcgagcggtaccggagcgccatgtcTAGGACCAAAAAGCACTTGAACAGCttttactcccaagccataagactgctgaacagttaagcaaatggctacccagactatttgcattgaccactTTTTATTTGGACTGACTCTCTTGTACCGGctttatgcacactcactggactctacccacacactcacacgtacAACACTGacattccaacacacacacacactcttcacaaACGCTGCCGATACTCTGCTTATGATCTATCCTGATTttctagtcacttttacccctacctacatgtacactactgttcaaaagtttgcggtcacttaaatgtatatttttttctttctttgtt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1706068 True 362 lncRNA 0.44 1 78745255 78745616

Neighbor

gene id symbol gene type direction distance location
LOC110494635 LOC106565704 coding upstream 16258 78719388 ~ 78728997 (+)
LOC110494632 LOC106565705 coding upstream 63956 78674377 ~ 78681299 (+)
LOC110494631 LOC106582819 coding upstream 75508 78653591 ~ 78669747 (+)
LOC110494629 LOC106565708 coding upstream 104373 78597140 ~ 78640882 (+)
LOC110494628 LOC106565709 coding upstream 169087 78554603 ~ 78576168 (+)
LOC110494637 LOC106565962 coding downstream 2222 78747838 ~ 78914408 (+)
LOC110493265 LOC106565960 coding downstream 177058 78922674 ~ 78932811 (+)
LOC110494640 LOC102295370 coding downstream 207472 78953088 ~ 79199957 (+)
LOC110494641 LOC106565967 coding downstream 455785 79201401 ~ 79216532 (+)
LOC110494642 LOC106565969 coding downstream 475664 79221280 ~ 79273445 (+)
G1492251 NA non-coding upstream 61098 78683945 ~ 78684157 (+)
G1492250 NA non-coding upstream 61326 78683463 ~ 78683929 (+)
G1492249 NA non-coding upstream 61942 78683056 ~ 78683313 (+)
G1492194 NA non-coding upstream 71704 78673158 ~ 78673551 (+)
G1492308 NA non-coding downstream 644 78746260 ~ 78746537 (+)
G1492300 NA non-coding downstream 32738 78778354 ~ 78780383 (+)
G1492314 NA non-coding downstream 34348 78779964 ~ 78810967 (+)
G1492315 NA non-coding downstream 34870 78780486 ~ 78781598 (+)
G1492003 NA other upstream 491947 78252629 ~ 78253308 (+)
G1491963 NA other upstream 554965 78189012 ~ 78190290 (+)
G1491899 NA other upstream 725439 78018368 ~ 78019816 (+)
G1491886 NA other upstream 736456 78008290 ~ 78008799 (+)
G1490016 NA other upstream 2061235 76683599 ~ 76684020 (+)
G1492310 NA other downstream 25131 78770747 ~ 78775727 (+)
LOC110493267 LOC106565976 other downstream 584003 79321093 ~ 79336076 (+)
tusc2 tusc2 other downstream 637029 79382417 ~ 79387551 (+)
G1495346 NA other downstream 2547824 81293440 ~ 81293926 (+)
G1495362 NA other downstream 2591401 81337017 ~ 81338163 (+)

Expression


Co-expression Network