Gene
RNA
| Item | Value |
|---|---|
| gene id | G1492300 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 78778354 ~ 78780383 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1706074 | True | 315 | lncRNA | 0.57 | 3 | 78778354 | 78780383 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494635 | LOC106565704 | coding | upstream | 49357 | 78719388 ~ 78728997 (+) |
| LOC110494632 | LOC106565705 | coding | upstream | 97055 | 78674377 ~ 78681299 (+) |
| LOC110494631 | LOC106582819 | coding | upstream | 108607 | 78653591 ~ 78669747 (+) |
| LOC110494629 | LOC106565708 | coding | upstream | 137472 | 78597140 ~ 78640882 (+) |
| LOC110494628 | LOC106565709 | coding | upstream | 202186 | 78554603 ~ 78576168 (+) |
| LOC110493265 | LOC106565960 | coding | downstream | 142291 | 78922674 ~ 78932811 (+) |
| LOC110494640 | LOC102295370 | coding | downstream | 172705 | 78953088 ~ 79199957 (+) |
| LOC110494641 | LOC106565967 | coding | downstream | 421018 | 79201401 ~ 79216532 (+) |
| LOC110494642 | LOC106565969 | coding | downstream | 440897 | 79221280 ~ 79273445 (+) |
| LOC110493266 | LOC106582806 | coding | downstream | 496918 | 79277301 ~ 79288650 (+) |
| G1492308 | NA | non-coding | upstream | 31817 | 78746260 ~ 78746537 (+) |
| G1492295 | NA | non-coding | upstream | 32738 | 78745255 ~ 78745616 (+) |
| G1492251 | NA | non-coding | upstream | 94197 | 78683945 ~ 78684157 (+) |
| G1492250 | NA | non-coding | upstream | 94425 | 78683463 ~ 78683929 (+) |
| G1492315 | NA | non-coding | downstream | 103 | 78780486 ~ 78781598 (+) |
| LOC110494637 | LOC106565962 | non-coding | downstream | 13626 | 78747838 ~ 78914408 (+) |
| G1492369 | NA | non-coding | downstream | 154752 | 78935135 ~ 78935476 (+) |
| G1492371 | NA | non-coding | downstream | 155964 | 78936347 ~ 78936629 (+) |
| G1493174 | NA | non-coding | downstream | 465572 | 79245955 ~ 79293250 (+) |
| G1492310 | NA | other | upstream | 2627 | 78770747 ~ 78775727 (+) |
| G1492003 | NA | other | upstream | 525046 | 78252629 ~ 78253308 (+) |
| G1491963 | NA | other | upstream | 588064 | 78189012 ~ 78190290 (+) |
| G1491899 | NA | other | upstream | 758538 | 78018368 ~ 78019816 (+) |
| G1491886 | NA | other | upstream | 769555 | 78008290 ~ 78008799 (+) |
| LOC110493267 | LOC106565976 | other | downstream | 549236 | 79321093 ~ 79336076 (+) |
| tusc2 | tusc2 | other | downstream | 602262 | 79382417 ~ 79387551 (+) |
| G1495346 | NA | other | downstream | 2513057 | 81293440 ~ 81293926 (+) |
| G1495362 | NA | other | downstream | 2556634 | 81337017 ~ 81338163 (+) |
| LOC110494696 | LOC106582736 | other | downstream | 2651828 | 81432188 ~ 81602161 (+) |
