Gene
RNA
| Item | Value |
|---|---|
| gene id | G1492314 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 78779964 ~ 78810967 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1706089 | True | 209 | lncRNA | 0.55 | 2 | 78779964 | 78810967 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494635 | LOC106565704 | coding | upstream | 50967 | 78719388 ~ 78728997 (+) |
| LOC110494632 | LOC106565705 | coding | upstream | 98665 | 78674377 ~ 78681299 (+) |
| LOC110494631 | LOC106582819 | coding | upstream | 110217 | 78653591 ~ 78669747 (+) |
| LOC110494629 | LOC106565708 | coding | upstream | 139082 | 78597140 ~ 78640882 (+) |
| LOC110494628 | LOC106565709 | coding | upstream | 203796 | 78554603 ~ 78576168 (+) |
| LOC110493265 | LOC106565960 | coding | downstream | 111707 | 78922674 ~ 78932811 (+) |
| LOC110494640 | LOC102295370 | coding | downstream | 142121 | 78953088 ~ 79199957 (+) |
| LOC110494641 | LOC106565967 | coding | downstream | 390434 | 79201401 ~ 79216532 (+) |
| LOC110494642 | LOC106565969 | coding | downstream | 410313 | 79221280 ~ 79273445 (+) |
| LOC110493266 | LOC106582806 | coding | downstream | 466334 | 79277301 ~ 79288650 (+) |
| G1492308 | NA | non-coding | upstream | 33427 | 78746260 ~ 78746537 (+) |
| G1492295 | NA | non-coding | upstream | 34348 | 78745255 ~ 78745616 (+) |
| G1492251 | NA | non-coding | upstream | 95807 | 78683945 ~ 78684157 (+) |
| G1492250 | NA | non-coding | upstream | 96035 | 78683463 ~ 78683929 (+) |
| G1492369 | NA | non-coding | downstream | 124168 | 78935135 ~ 78935476 (+) |
| G1492371 | NA | non-coding | downstream | 125380 | 78936347 ~ 78936629 (+) |
| G1493174 | NA | non-coding | downstream | 434988 | 79245955 ~ 79293250 (+) |
| G1493185 | NA | non-coding | downstream | 479329 | 79290296 ~ 79291967 (+) |
| LOC110494644 | LOC106565971 | non-coding | downstream | 487578 | 79298520 ~ 79314874 (+) |
| G1492310 | NA | other | upstream | 4237 | 78770747 ~ 78775727 (+) |
| G1492003 | NA | other | upstream | 526656 | 78252629 ~ 78253308 (+) |
| G1491963 | NA | other | upstream | 589674 | 78189012 ~ 78190290 (+) |
| G1491899 | NA | other | upstream | 760148 | 78018368 ~ 78019816 (+) |
| G1491886 | NA | other | upstream | 771165 | 78008290 ~ 78008799 (+) |
| LOC110493267 | LOC106565976 | other | downstream | 518652 | 79321093 ~ 79336076 (+) |
| tusc2 | tusc2 | other | downstream | 571678 | 79382417 ~ 79387551 (+) |
| G1495346 | NA | other | downstream | 2482473 | 81293440 ~ 81293926 (+) |
| G1495362 | NA | other | downstream | 2526050 | 81337017 ~ 81338163 (+) |
| LOC110494696 | LOC106582736 | other | downstream | 2621244 | 81432188 ~ 81602161 (+) |
