G1492371


Basic Information

Item Value
gene id G1492371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 78936347 ~ 78936629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1706148
gttcttgacacaaaccggtgtgcctgacacctactaccatacccagttcttgacacaaaccggtgcgcctgacacctactaccatacccagttcttgacacaaaccggtgtgcctgacacctactaccatacccagttcttgacacaaaccggtgcgcctgacacctactaccatacccagttcttgacacaaaccggtgcgcctgacacctactaccatacccagttcttgacacaaaccggtgtgcctgacacctactaccatacccagttcttgacacaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595442

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1706148 True 283 lncRNA 0.52 1 78936347 78936629

Neighbor

gene id symbol gene type direction distance location
LOC110493265 LOC106565960 coding upstream 3536 78922674 ~ 78932811 (+)
LOC110494637 LOC106565962 coding upstream 21939 78747838 ~ 78914408 (+)
LOC110494635 LOC106565704 coding upstream 207350 78719388 ~ 78728997 (+)
LOC110494632 LOC106565705 coding upstream 255048 78674377 ~ 78681299 (+)
LOC110494631 LOC106582819 coding upstream 266600 78653591 ~ 78669747 (+)
LOC110494640 LOC102295370 coding downstream 16459 78953088 ~ 79199957 (+)
LOC110494641 LOC106565967 coding downstream 264772 79201401 ~ 79216532 (+)
LOC110494642 LOC106565969 coding downstream 284651 79221280 ~ 79273445 (+)
LOC110493266 LOC106582806 coding downstream 340672 79277301 ~ 79288650 (+)
LOC110494644 LOC106565971 coding downstream 361891 79298520 ~ 79314874 (+)
G1492369 NA non-coding upstream 871 78935135 ~ 78935476 (+)
G1492314 NA non-coding upstream 125380 78779964 ~ 78810967 (+)
G1492315 NA non-coding upstream 154749 78780486 ~ 78781598 (+)
G1492300 NA non-coding upstream 155964 78778354 ~ 78780383 (+)
G1493174 NA non-coding downstream 309326 79245955 ~ 79293250 (+)
G1493185 NA non-coding downstream 353667 79290296 ~ 79291967 (+)
LOC110493267 LOC106565976 non-coding downstream 384633 79321093 ~ 79336076 (+)
LOC118936427 LOC106582800 non-coding downstream 402005 79338634 ~ 79350582 (+)
G1492310 NA other upstream 160620 78770747 ~ 78775727 (+)
G1492003 NA other upstream 683039 78252629 ~ 78253308 (+)
G1491963 NA other upstream 746057 78189012 ~ 78190290 (+)
G1491899 NA other upstream 916531 78018368 ~ 78019816 (+)
G1491886 NA other upstream 927548 78008290 ~ 78008799 (+)
tusc2 tusc2 other downstream 446016 79382417 ~ 79387551 (+)
G1495346 NA other downstream 2356811 81293440 ~ 81293926 (+)
G1495362 NA other downstream 2400388 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 2495582 81432188 ~ 81602161 (+)

Expression


Co-expression Network