G1493115



Basic Information


Item Value
gene id G1493115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79132272 ~ 79135716 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1706979
AAAGTATTAATTTCAGGATTTCCTGAATTAgaaatgaactgaactaaactaTTGTTTTGATCTGTCCCTTCTTAAGATTTTGGATTGTGACTACAGATGGTATCTAGATGCATGAAAGGGATAATTTGACCAAATGGTGTGGACCTCAAAGAAATGAGGTTCAATCCGGCCATGTACTTCTATCGAGAGACGTTAGTCTGAGCCAGCAACCGGTGTACAGCATCCAGTTGAAATAATTGTAAGAATACGTCAAAGATAAATACATAACGCAGAGACagaggacgagaggtcaaaaGGACGAGAAGTCAATAGAGTAATAACAATTAAGggaaatagtgttttttctgtaatagAGAATTATTGATCAGTGGttcagagacatgggaggaatatGTCTTCTGAAATA

Function


NR:

description
gamma-aminobutyric acid receptor subunit beta-2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1706979 True 406 lncRNA 0.37 2 79132272 79135716

Neighbor


gene id symbol gene type direction distance location
LOC110493264 NA coding downstream 295878 78741202 ~ 78836394 (-)
LOC110494630 LOC106565707 coding downstream 480429 78642915 ~ 78651843 (-)
LOC110494625 LOC106565710 coding downstream 624174 78484389 ~ 78508098 (-)
LOC110494623 LOC106565711 coding downstream 699699 78427699 ~ 78432573 (-)
LOC110494620 LOC106565713 coding downstream 742423 78214999 ~ 78389849 (-)
LOC110494643 LOC106565970 coding upstream 156730 79292446 ~ 79297728 (-)
LOC110494645 LOC106565972 coding upstream 179484 79315200 ~ 79321011 (-)
LOC110494647 glyctk coding upstream 187508 79323224 ~ 79329499 (-)
hemk1 hemk1 coding upstream 220178 79355894 ~ 79359054 (-)
LOC110493269 LOC106566002 coding upstream 708694 79844410 ~ 79845741 (-)
G1493079 NA non-coding downstream 65675 79063694 ~ 79066597 (-)
G1493006 NA non-coding downstream 184789 78947160 ~ 78947483 (-)
G1493000 NA non-coding downstream 195037 78936932 ~ 78937235 (-)
G1492999 NA non-coding downstream 196362 78935691 ~ 78935910 (-)
G1492994 NA non-coding downstream 207212 78924831 ~ 78925060 (-)
G1493151 NA non-coding upstream 62031 79197747 ~ 79199917 (-)
G1493152 NA non-coding upstream 64701 79200417 ~ 79200651 (-)
G1493332 NA non-coding upstream 79568 79215284 ~ 79217147 (-)
G1493382 NA non-coding upstream 154567 79290283 ~ 79291656 (-)
G1493367 NA non-coding upstream 178208 79313924 ~ 79314787 (-)
G1492898 NA other downstream 316843 78771571 ~ 78815429 (-)
G1492901 NA other downstream 318317 78803860 ~ 78813955 (-)
G1492910 NA other downstream 350877 78778352 ~ 78781395 (-)
G1492897 NA other downstream 360318 78770740 ~ 78771954 (-)
G1492729 NA other downstream 656766 78473018 ~ 78475506 (-)
G1493395 LOC106582800 other upstream 212515 79348231 ~ 79349389 (-)
G1494054 NA other upstream 935923 80071639 ~ 80087637 (-)
G1494870 NA other upstream 1462278 80597994 ~ 80598532 (-)
G1494924 NA other upstream 1556706 80692422 ~ 80694102 (-)
G1495003 NA other upstream 1759372 80895088 ~ 80895437 (-)

Expression



Co-expression Network