G1493174


Basic Information

Item Value
gene id G1493174
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79245955 ~ 79293250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707047
CCTCACTGTGGTAGATAGTATTGAAAATAAGTGTACAAGCCATGACTCATGTCAAGACCTGCATGGAGACATTTGCTTTGTCAGGCTGTATATATTATCGTATACTATCGTGTCTCCTCATGCTTTTTCTTTGTCTGTTTCCTCACTTCTCTTCTCATTGGTGGTGGTGCCCCTGAAACGCTGACTCAGTTCTTCAGACAACACTGTGCAACATGATTT

Function

NR:

description
probable glutamate receptor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707047 True 219 lncRNA 0.42 2 79245955 79293250

Neighbor

gene id symbol gene type direction distance location
LOC110494641 LOC106565967 coding upstream 29423 79201401 ~ 79216532 (+)
LOC110494640 LOC102295370 coding upstream 45998 78953088 ~ 79199957 (+)
LOC110493265 LOC106565960 coding upstream 313144 78922674 ~ 78932811 (+)
LOC110494637 LOC106565962 coding upstream 331547 78747838 ~ 78914408 (+)
LOC110494635 LOC106565704 coding upstream 516958 78719388 ~ 78728997 (+)
LOC110494644 LOC106565971 coding downstream 5270 79298520 ~ 79314874 (+)
LOC110493267 LOC106565976 coding downstream 27843 79321093 ~ 79336076 (+)
LOC118936427 LOC106582800 coding downstream 49815 79338634 ~ 79350582 (+)
LOC110494652 LOC106565979 coding downstream 58522 79351772 ~ 79355509 (+)
nprl2 tusc4 coding downstream 66028 79359278 ~ 79366137 (+)
G1492371 NA non-coding upstream 309326 78936347 ~ 78936629 (+)
G1492369 NA non-coding upstream 310479 78935135 ~ 78935476 (+)
G1492314 NA non-coding upstream 434988 78779964 ~ 78810967 (+)
G1492315 NA non-coding upstream 464357 78780486 ~ 78781598 (+)
G1493195 NA non-coding downstream 46448 79339698 ~ 79444677 (+)
G1493309 NA non-coding downstream 212138 79505388 ~ 79505593 (+)
G1492310 NA other upstream 470228 78770747 ~ 78775727 (+)
G1492003 NA other upstream 992647 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1055665 78189012 ~ 78190290 (+)
G1491899 NA other upstream 1226139 78018368 ~ 78019816 (+)
G1491886 NA other upstream 1237156 78008290 ~ 78008799 (+)
tusc2 tusc2 other downstream 89395 79382417 ~ 79387551 (+)
G1495346 NA other downstream 2000190 81293440 ~ 81293926 (+)
G1495362 NA other downstream 2043767 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 2138961 81432188 ~ 81602161 (+)

Expression


Co-expression Network