G1493185


Basic Information

Item Value
gene id G1493185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79290296 ~ 79291967 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707063
CAAtttatgtttattaattatgaaattataacaaatattaataacattccactcaTGAGGCAATTAGataatttgactgcaggaaagggatcTATTTCAacaatttattttctgttttttattttaacaaGATGCTCATTCAAGTAAGCATTTTGATGTTCTATTAGATTTCTGTTGAATGAAAAGCACGTAAAATTTTGTGGAAATGCAATTGAAGTTAATCGTCTTGTTCTTTCCCTGTGCCATTGCAGGGTTCTTGATGCCattgattgggtctcaatgtaggcagcagcctttctgagtttgatggccttgagatagaagctgttgtttcctaccttcaccacctgggggcggcctgtcagaatgtccaggacccagttgcacagggtggggttgagacacagggcctccagcttgatgatgagcttggagtgtactatggtgttgaattctgagttgaattctgagctgtagtcaatgaacagcactcttacatacagtggggcaaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaatcttcatcataggtacacttcaactacgacagacaaaatgagggaaaaaatccagaaaatcacattgtaggaggCTGCTGTGCACTGGCAGCCTccgaatcccccccccccccctcctcccagaACCATGGCAGTTATGGCCATCAGGTGAAGCCTGTACCCAATGCCTATGCggctgggttggatgcgcgctgtgttaagaagcagtacggctggttgggttgtgtatcggaggacgcatgacattcagccttcgtctctcccgagcccgtacgggagttgtagcaatgagacaagatagtagctactacaacaattggataccatgaaattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707063 True 912 lncRNA 0.44 2 79290296 79291967

Neighbor

gene id symbol gene type direction distance location
LOC110493266 LOC106582806 coding upstream 1646 79277301 ~ 79288650 (+)
LOC110494642 LOC106565969 coding upstream 16851 79221280 ~ 79273445 (+)
LOC110494641 LOC106565967 coding upstream 73764 79201401 ~ 79216532 (+)
LOC110494640 LOC102295370 coding upstream 90339 78953088 ~ 79199957 (+)
LOC110493265 LOC106565960 coding upstream 357485 78922674 ~ 78932811 (+)
LOC110494644 LOC106565971 coding downstream 6553 79298520 ~ 79314874 (+)
LOC110493267 LOC106565976 coding downstream 29126 79321093 ~ 79336076 (+)
LOC118936427 LOC106582800 coding downstream 51098 79338634 ~ 79350582 (+)
LOC110494652 LOC106565979 coding downstream 59805 79351772 ~ 79355509 (+)
nprl2 tusc4 coding downstream 67311 79359278 ~ 79366137 (+)
G1492371 NA non-coding upstream 353667 78936347 ~ 78936629 (+)
G1492369 NA non-coding upstream 354820 78935135 ~ 78935476 (+)
LOC110494637 LOC106565962 non-coding upstream 460710 78747838 ~ 78914408 (+)
G1492314 NA non-coding upstream 479329 78779964 ~ 78810967 (+)
G1493195 NA non-coding downstream 47731 79339698 ~ 79444677 (+)
G1493309 NA non-coding downstream 213421 79505388 ~ 79505593 (+)
G1492310 NA other upstream 514569 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1036988 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1100006 78189012 ~ 78190290 (+)
G1491899 NA other upstream 1270480 78018368 ~ 78019816 (+)
G1491886 NA other upstream 1281497 78008290 ~ 78008799 (+)
tusc2 tusc2 other downstream 90678 79382417 ~ 79387551 (+)
G1495346 NA other downstream 2001473 81293440 ~ 81293926 (+)
G1495362 NA other downstream 2045050 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 2140244 81432188 ~ 81602161 (+)

Expression


Co-expression Network