G1493395 (LOC106582800)


Basic Information

Item Value
gene id G1493395
gene name LOC106582800
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79348231 ~ 79349389 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707296
aaaaTTGATTTCCTTAGTTTTATCCTATTGTTGATGTTCATGAATAGCATGTACAGTAATGACAAGCAAAGGgaggtaaaaataaaaatgacagGAGAAATCTGTCCATGTTCTTCTCCTTTTCCTTCCTCGTGGCCAAACAAGCTGCCAGATGGCATGGCAACAGGAGGATGAGGATTGAGGGCAGGGCTGGGGATGGCTTGGGCTGGGGTGATGACAaagctctttccctctctctaactctccagcCTGCCCTCCCCATCCGCTGGACGCTTGATGAGGCGCTTACTGCCTTTCTTCCCTGCTGGGCCACAAGGTTTGGCGAAGGCCTGCTGGAAGGCATGCTGCTTAGGATTAACCTCATCATACAGGAACTCCTCTGTCAACTCATCCCCATTGTCAATTTCCAtctTCTTGGCAACCTCCAGATGGTAATCTTTCTCCACCTCATCCAGCAGTCGACCCTTACAACTGGAGTACAGCATCCGCTCTTTAATGCTACAGCTGTAACCTGGCAT

Function

NR:

description
PREDICTED: twinfilin-2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707296 True 518 TUCP 0.49 2 79348231 79349389

Neighbor

gene id symbol gene type direction distance location
LOC110494647 glyctk coding downstream 18732 79323224 ~ 79329499 (-)
LOC110494645 LOC106565972 coding downstream 27220 79315200 ~ 79321011 (-)
LOC110494643 LOC106565970 coding downstream 50503 79292446 ~ 79297728 (-)
LOC110493264 NA coding downstream 511837 78741202 ~ 78836394 (-)
LOC110494630 LOC106565707 coding downstream 696388 78642915 ~ 78651843 (-)
hemk1 hemk1 coding upstream 6505 79355894 ~ 79359054 (-)
LOC110493269 LOC106566002 coding upstream 495021 79844410 ~ 79845741 (-)
LOC110494659 LOC106565998 coding upstream 535104 79884493 ~ 79891542 (-)
cenps apitd1 coding upstream 581111 79930500 ~ 79933811 (-)
LOC110494664 ret7 coding upstream 584477 79933866 ~ 79938222 (-)
G1493367 NA non-coding downstream 33444 79313924 ~ 79314787 (-)
G1493382 NA non-coding downstream 56575 79290283 ~ 79291656 (-)
G1493332 NA non-coding downstream 131084 79215284 ~ 79217147 (-)
G1493152 NA non-coding downstream 147580 79200417 ~ 79200651 (-)
G1493151 NA non-coding downstream 148314 79197747 ~ 79199917 (-)
G1493415 rassf1 non-coding upstream 29733 79379122 ~ 79382147 (-)
G1493483 NA non-coding upstream 152035 79501424 ~ 79502027 (-)
G1493490 NA non-coding upstream 167892 79517281 ~ 79517527 (-)
G1493492 NA non-coding upstream 169984 79519373 ~ 79519585 (-)
G1493493 NA non-coding upstream 170884 79520273 ~ 79520539 (-)
G1492898 NA other downstream 532802 78771571 ~ 78815429 (-)
G1492901 NA other downstream 534276 78803860 ~ 78813955 (-)
G1492910 NA other downstream 566836 78778352 ~ 78781395 (-)
G1492897 NA other downstream 576277 78770740 ~ 78771954 (-)
G1492729 NA other downstream 872725 78473018 ~ 78475506 (-)
G1494054 NA other upstream 722250 80071639 ~ 80087637 (-)
G1494870 NA other upstream 1248605 80597994 ~ 80598532 (-)
G1494924 NA other upstream 1343033 80692422 ~ 80694102 (-)
G1495003 NA other upstream 1545699 80895088 ~ 80895437 (-)
G1495113 NA other upstream 1716582 81065971 ~ 81066682 (-)

Expression


Co-expression Network