G1493483



Basic Information


Item Value
gene id G1493483
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79501424 ~ 79502027 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1707408
gtggagacttggtctggactctccaccgttgtagcaccgatggaaactcctacacaCCTGCCTGAGCACTCCTCCGACCACCCCtgtagagccctctgttgccacgaaatccTGGGGTTGTGACGGGCCAACCAGGGGAtccccaacaccaccggaaacgcaggagaatcaatgaggaagagactaattctctcctcatgaccctcctgcgtaaccatATCCAGTGgagccgtggcctccctgactagccctgaccctaatggtcggctatctaaggcgtGCACTGGGAAGGGTTTATCCAGCTGAACAAGGGGAATCCCTAACCTGTTCGCTAAACCGCGGTCAATAAAATTCCCcgccgcgcctgaatctactagcgccttatgccggGAAAGAGGGGAAAATTTAGGAAAAACAATCCATACATACACGTgaccaacagggggctctgggtgagcctggtgccgactcacctgaGGTGTCCGGGCAGTGCTCGGCCTGGCGTCTCGACTCCCGGggggacccccccagcaccggtcagcagtgtgccctctgcgaccACAGCTGGCACAGGAAAGGCCCCCTCCTCCGGTCGCCCTCGCTG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1707408 True 604 lncRNA 0.59 1 79501424 79502027

Neighbor


gene id symbol gene type direction distance location
hemk1 hemk1 coding downstream 142370 79355894 ~ 79359054 (-)
LOC110494647 glyctk coding downstream 171925 79323224 ~ 79329499 (-)
LOC110494645 LOC106565972 coding downstream 180413 79315200 ~ 79321011 (-)
LOC110494643 LOC106565970 coding downstream 203696 79292446 ~ 79297728 (-)
LOC110493264 NA coding downstream 665030 78741202 ~ 78836394 (-)
LOC110493269 LOC106566002 coding upstream 342383 79844410 ~ 79845741 (-)
LOC110494659 LOC106565998 coding upstream 382466 79884493 ~ 79891542 (-)
cenps apitd1 coding upstream 428473 79930500 ~ 79933811 (-)
LOC110494664 ret7 coding upstream 431839 79933866 ~ 79938222 (-)
h6pd LOC106565995 coding upstream 442233 79944260 ~ 79952863 (-)
G1493415 rassf1 non-coding downstream 119277 79379122 ~ 79382147 (-)
G1493367 NA non-coding downstream 186637 79313924 ~ 79314787 (-)
G1493382 NA non-coding downstream 209768 79290283 ~ 79291656 (-)
G1493332 NA non-coding downstream 284277 79215284 ~ 79217147 (-)
G1493152 NA non-coding downstream 300773 79200417 ~ 79200651 (-)
G1493490 NA non-coding upstream 15254 79517281 ~ 79517527 (-)
G1493492 NA non-coding upstream 17346 79519373 ~ 79519585 (-)
G1493493 NA non-coding upstream 18246 79520273 ~ 79520539 (-)
G1493500 NA non-coding upstream 23584 79525611 ~ 79525839 (-)
G1493779 NA non-coding upstream 36702 79538729 ~ 79542434 (-)
G1493395 LOC106582800 other downstream 152035 79348231 ~ 79349389 (-)
G1492898 NA other downstream 685995 78771571 ~ 78815429 (-)
G1492901 NA other downstream 687469 78803860 ~ 78813955 (-)
G1492910 NA other downstream 720029 78778352 ~ 78781395 (-)
G1492897 NA other downstream 729470 78770740 ~ 78771954 (-)
G1494054 NA other upstream 569612 80071639 ~ 80087637 (-)
G1494870 NA other upstream 1095967 80597994 ~ 80598532 (-)
G1494924 NA other upstream 1190395 80692422 ~ 80694102 (-)
G1495003 NA other upstream 1393061 80895088 ~ 80895437 (-)
G1495113 NA other upstream 1563944 81065971 ~ 81066682 (-)

Expression



Co-expression Network