G1493318


Basic Information

Item Value
gene id G1493318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79516782 ~ 79517163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707202
taagttaatactttgtagcgccaccttttgctgcgattacagctgtaagttgcttggggtatgtctctatgagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctctatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707202 True 382 lncRNA 0.42 1 79516782 79517163

Neighbor

gene id symbol gene type direction distance location
hyal1 LOC106565982 coding upstream 114897 79398640 ~ 79401885 (+)
LOC110494654 LOC106565981 coding upstream 123602 79389233 ~ 79393180 (+)
tusc2 tusc2 coding upstream 129231 79382417 ~ 79387551 (+)
LOC110494653 rassf1 coding upstream 134493 79370819 ~ 79382289 (+)
nprl2 tusc4 coding upstream 150645 79359278 ~ 79366137 (+)
LOC110493268 LOC106582605 coding downstream 30653 79547816 ~ 79844313 (+)
LOC110494656 LOC106566001 coding downstream 331319 79848482 ~ 79871163 (+)
LOC110494660 LOC106565999 coding downstream 357170 79874333 ~ 79882252 (+)
LOC110494661 LOC105025424 coding downstream 382855 79900018 ~ 79925378 (+)
LOC110494662 LOC106565996 coding downstream 409197 79926360 ~ 79930803 (+)
G1493309 NA non-coding upstream 11189 79505388 ~ 79505593 (+)
G1493195 NA non-coding upstream 72105 79339698 ~ 79444677 (+)
LOC118936427 LOC106582800 non-coding upstream 173356 79338634 ~ 79350582 (+)
LOC110493267 LOC106565976 non-coding upstream 193572 79321093 ~ 79336076 (+)
LOC110494644 LOC106565971 non-coding upstream 201944 79298520 ~ 79314874 (+)
G1493488 NA non-coding downstream 134 79517297 ~ 79517805 (+)
G1493498 NA non-coding downstream 5861 79523024 ~ 79523296 (+)
G1493511 NA non-coding downstream 27283 79544446 ~ 79544948 (+)
G1493681 NA non-coding downstream 282807 79799970 ~ 79801271 (+)
G1493698 NA non-coding downstream 330072 79847235 ~ 79847725 (+)
G1492310 NA other upstream 741055 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1263474 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1326492 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1776277 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1819854 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1915048 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 2311569 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 2646043 82163138 ~ 82169750 (+)

Expression


Co-expression Network