G1493490



Basic Information


Item Value
gene id G1493490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79517281 ~ 79517527 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1707415
agctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaggtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaac

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1707415 True 247 lncRNA 0.42 1 79517281 79517527

Neighbor


gene id symbol gene type direction distance location
hemk1 hemk1 coding downstream 158227 79355894 ~ 79359054 (-)
LOC110494647 glyctk coding downstream 187782 79323224 ~ 79329499 (-)
LOC110494645 LOC106565972 coding downstream 196270 79315200 ~ 79321011 (-)
LOC110494643 LOC106565970 coding downstream 219553 79292446 ~ 79297728 (-)
LOC110493264 NA coding downstream 680887 78741202 ~ 78836394 (-)
LOC110493269 LOC106566002 coding upstream 326883 79844410 ~ 79845741 (-)
LOC110494659 LOC106565998 coding upstream 366966 79884493 ~ 79891542 (-)
cenps apitd1 coding upstream 412973 79930500 ~ 79933811 (-)
LOC110494664 ret7 coding upstream 416339 79933866 ~ 79938222 (-)
h6pd LOC106565995 coding upstream 426733 79944260 ~ 79952863 (-)
G1493483 NA non-coding downstream 15254 79501424 ~ 79502027 (-)
G1493415 rassf1 non-coding downstream 135134 79379122 ~ 79382147 (-)
G1493367 NA non-coding downstream 202494 79313924 ~ 79314787 (-)
G1493382 NA non-coding downstream 225625 79290283 ~ 79291656 (-)
G1493332 NA non-coding downstream 300134 79215284 ~ 79217147 (-)
G1493492 NA non-coding upstream 1846 79519373 ~ 79519585 (-)
G1493493 NA non-coding upstream 2746 79520273 ~ 79520539 (-)
G1493500 NA non-coding upstream 8084 79525611 ~ 79525839 (-)
G1493779 NA non-coding upstream 21202 79538729 ~ 79542434 (-)
G1493798 NA non-coding upstream 54172 79571699 ~ 79572046 (-)
G1493395 LOC106582800 other downstream 167892 79348231 ~ 79349389 (-)
G1492898 NA other downstream 701852 78771571 ~ 78815429 (-)
G1492901 NA other downstream 703326 78803860 ~ 78813955 (-)
G1492910 NA other downstream 735886 78778352 ~ 78781395 (-)
G1492897 NA other downstream 745327 78770740 ~ 78771954 (-)
G1494054 NA other upstream 554112 80071639 ~ 80087637 (-)
G1494870 NA other upstream 1080467 80597994 ~ 80598532 (-)
G1494924 NA other upstream 1174895 80692422 ~ 80694102 (-)
G1495003 NA other upstream 1377561 80895088 ~ 80895437 (-)
G1495113 NA other upstream 1548444 81065971 ~ 81066682 (-)

Expression



Co-expression Network