G1493488


Basic Information

Item Value
gene id G1493488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79517297 ~ 79517805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707413
acataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaaccttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctacatctctgatcagtcttctccttgtatgagctgaaagtttagagggatggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatgtttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707413 True 509 lncRNA 0.43 1 79517297 79517805

Neighbor

gene id symbol gene type direction distance location
hyal1 LOC106565982 coding upstream 115412 79398640 ~ 79401885 (+)
LOC110494654 LOC106565981 coding upstream 124117 79389233 ~ 79393180 (+)
tusc2 tusc2 coding upstream 129746 79382417 ~ 79387551 (+)
LOC110494653 rassf1 coding upstream 135008 79370819 ~ 79382289 (+)
nprl2 tusc4 coding upstream 151160 79359278 ~ 79366137 (+)
LOC110493268 LOC106582605 coding downstream 30011 79547816 ~ 79844313 (+)
LOC110494656 LOC106566001 coding downstream 330677 79848482 ~ 79871163 (+)
LOC110494660 LOC106565999 coding downstream 356528 79874333 ~ 79882252 (+)
LOC110494661 LOC105025424 coding downstream 382213 79900018 ~ 79925378 (+)
LOC110494662 LOC106565996 coding downstream 408555 79926360 ~ 79930803 (+)
G1493318 NA non-coding upstream 134 79516782 ~ 79517163 (+)
G1493309 NA non-coding upstream 11704 79505388 ~ 79505593 (+)
G1493195 NA non-coding upstream 72620 79339698 ~ 79444677 (+)
LOC118936427 LOC106582800 non-coding upstream 173871 79338634 ~ 79350582 (+)
LOC110493267 LOC106565976 non-coding upstream 194087 79321093 ~ 79336076 (+)
G1493498 NA non-coding downstream 5219 79523024 ~ 79523296 (+)
G1493511 NA non-coding downstream 26641 79544446 ~ 79544948 (+)
G1493681 NA non-coding downstream 282165 79799970 ~ 79801271 (+)
G1493698 NA non-coding downstream 329430 79847235 ~ 79847725 (+)
G1493517 LOC106565995 non-coding downstream 425286 79943091 ~ 79950459 (+)
G1492310 NA other upstream 741570 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1263989 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1327007 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1775635 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1819212 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1914406 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 2310927 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 2645401 82163138 ~ 82169750 (+)

Expression


Co-expression Network