Gene
RNA
| Item | Value |
|---|---|
| gene id | G1493498 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 79523024 ~ 79523296 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1707423 | True | 273 | lncRNA | 0.32 | 1 | 79523024 | 79523296 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hyal1 | LOC106565982 | coding | upstream | 121139 | 79398640 ~ 79401885 (+) |
| LOC110494654 | LOC106565981 | coding | upstream | 129844 | 79389233 ~ 79393180 (+) |
| tusc2 | tusc2 | coding | upstream | 135473 | 79382417 ~ 79387551 (+) |
| LOC110494653 | rassf1 | coding | upstream | 140735 | 79370819 ~ 79382289 (+) |
| nprl2 | tusc4 | coding | upstream | 156887 | 79359278 ~ 79366137 (+) |
| LOC110493268 | LOC106582605 | coding | downstream | 24520 | 79547816 ~ 79844313 (+) |
| LOC110494656 | LOC106566001 | coding | downstream | 325186 | 79848482 ~ 79871163 (+) |
| LOC110494660 | LOC106565999 | coding | downstream | 351037 | 79874333 ~ 79882252 (+) |
| LOC110494661 | LOC105025424 | coding | downstream | 376722 | 79900018 ~ 79925378 (+) |
| LOC110494662 | LOC106565996 | coding | downstream | 403064 | 79926360 ~ 79930803 (+) |
| G1493488 | NA | non-coding | upstream | 5219 | 79517297 ~ 79517805 (+) |
| G1493318 | NA | non-coding | upstream | 5861 | 79516782 ~ 79517163 (+) |
| G1493309 | NA | non-coding | upstream | 17431 | 79505388 ~ 79505593 (+) |
| G1493195 | NA | non-coding | upstream | 78347 | 79339698 ~ 79444677 (+) |
| LOC118936427 | LOC106582800 | non-coding | upstream | 179598 | 79338634 ~ 79350582 (+) |
| G1493511 | NA | non-coding | downstream | 21150 | 79544446 ~ 79544948 (+) |
| G1493681 | NA | non-coding | downstream | 276674 | 79799970 ~ 79801271 (+) |
| G1493698 | NA | non-coding | downstream | 323939 | 79847235 ~ 79847725 (+) |
| G1493517 | LOC106565995 | non-coding | downstream | 419795 | 79943091 ~ 79950459 (+) |
| G1493733 | NA | non-coding | downstream | 449716 | 79973012 ~ 79973225 (+) |
| LOC110493267 | LOC106565976 | other | upstream | 186952 | 79321093 ~ 79336076 (+) |
| G1492310 | NA | other | upstream | 747297 | 78770747 ~ 78775727 (+) |
| G1492003 | NA | other | upstream | 1269716 | 78252629 ~ 78253308 (+) |
| G1491963 | NA | other | upstream | 1332734 | 78189012 ~ 78190290 (+) |
| G1495346 | NA | other | downstream | 1770144 | 81293440 ~ 81293926 (+) |
| G1495362 | NA | other | downstream | 1813721 | 81337017 ~ 81338163 (+) |
| LOC110494696 | LOC106582736 | other | downstream | 1908915 | 81432188 ~ 81602161 (+) |
| LOC110494698 | LOC106566043 | other | downstream | 2305436 | 81828571 ~ 81847540 (+) |
| G1496351 | LOC106566032 | other | downstream | 2639910 | 82163138 ~ 82169750 (+) |
