Gene
RNA
| Item | Value |
|---|---|
| gene id | G1493511 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 79544446 ~ 79544948 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1707437 | True | 235 | lncRNA | 0.56 | 2 | 79544446 | 79544948 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hyal1 | LOC106565982 | coding | upstream | 142561 | 79398640 ~ 79401885 (+) |
| LOC110494654 | LOC106565981 | coding | upstream | 151266 | 79389233 ~ 79393180 (+) |
| tusc2 | tusc2 | coding | upstream | 156895 | 79382417 ~ 79387551 (+) |
| LOC110494653 | rassf1 | coding | upstream | 162157 | 79370819 ~ 79382289 (+) |
| nprl2 | tusc4 | coding | upstream | 178309 | 79359278 ~ 79366137 (+) |
| LOC110493268 | LOC106582605 | coding | downstream | 2868 | 79547816 ~ 79844313 (+) |
| LOC110494656 | LOC106566001 | coding | downstream | 303534 | 79848482 ~ 79871163 (+) |
| LOC110494660 | LOC106565999 | coding | downstream | 329385 | 79874333 ~ 79882252 (+) |
| LOC110494661 | LOC105025424 | coding | downstream | 355070 | 79900018 ~ 79925378 (+) |
| LOC110494662 | LOC106565996 | coding | downstream | 381412 | 79926360 ~ 79930803 (+) |
| G1493498 | NA | non-coding | upstream | 21150 | 79523024 ~ 79523296 (+) |
| G1493488 | NA | non-coding | upstream | 26641 | 79517297 ~ 79517805 (+) |
| G1493318 | NA | non-coding | upstream | 27283 | 79516782 ~ 79517163 (+) |
| G1493309 | NA | non-coding | upstream | 38853 | 79505388 ~ 79505593 (+) |
| G1493195 | NA | non-coding | upstream | 99769 | 79339698 ~ 79444677 (+) |
| G1493681 | NA | non-coding | downstream | 255022 | 79799970 ~ 79801271 (+) |
| G1493698 | NA | non-coding | downstream | 302287 | 79847235 ~ 79847725 (+) |
| G1493517 | LOC106565995 | non-coding | downstream | 398143 | 79943091 ~ 79950459 (+) |
| G1493733 | NA | non-coding | downstream | 428064 | 79973012 ~ 79973225 (+) |
| G1493734 | NA | non-coding | downstream | 429184 | 79974132 ~ 79974513 (+) |
| LOC110493267 | LOC106565976 | other | upstream | 208374 | 79321093 ~ 79336076 (+) |
| G1492310 | NA | other | upstream | 768719 | 78770747 ~ 78775727 (+) |
| G1492003 | NA | other | upstream | 1291138 | 78252629 ~ 78253308 (+) |
| G1491963 | NA | other | upstream | 1354156 | 78189012 ~ 78190290 (+) |
| G1495346 | NA | other | downstream | 1748492 | 81293440 ~ 81293926 (+) |
| G1495362 | NA | other | downstream | 1792069 | 81337017 ~ 81338163 (+) |
| LOC110494696 | LOC106582736 | other | downstream | 1887263 | 81432188 ~ 81602161 (+) |
| LOC110494698 | LOC106566043 | other | downstream | 2283784 | 81828571 ~ 81847540 (+) |
| G1496351 | LOC106566032 | other | downstream | 2618258 | 82163138 ~ 82169750 (+) |
