G1493681


Basic Information

Item Value
gene id G1493681
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79799970 ~ 79801271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707619
CAATAACAGCATTCCATGGATCAATAAATTATTCCAAAAACATCTTTGACGTTTTGAATCGATAAAATTAACCTACTGCTGTGGTTTATACTGTGCACTACTGTGGTTAACACAGAGAGATGTTTATACTGTGCACTACTGTGGTTAACACAGAGAGATGTTTATACTGTGCACTACTGTGGTTAACACAGAGAGATGTTTAAACTGTGCACTACTGGGGTTAACACAAAGAGATGTTTATATTGTGCACTACTGTGGTTAACACAGAGAAATGtttatactgtacactactgtggttaacacagagagatgtttatactgtacactactgtggttaacacagagagatgtttatactgtacactactgtggttaacacagagagatgtttatactgtacactactgtggtTAACACAGAGAGATGTTTATACTGTGCACTACTGGGGTTAACACAAAGATATGTTTATATTGTGCACTACTGTGGTTAACACAGAGAGATGtttatactgtacactactgtggtTAACACAGAGATATGTTTATACTGTGCACTACTGTGGTTAACACAGAGAGATGTTTATACTGTGCACTACTGTGGTTAACACAGAGAGATGTTTATACTGTGCACTACTGGGGTTAACACAAAGAGATGTTTATACTGTGCACTACTGTGGTTAACAAGAGAGATGCTTATACTGTGCACTACTGTGGTTAACAGAGAGATATGtttatactgtacactactgtggttaacacagagagatgtttatactgtacactactgtggtTAACATAGAGAGGTGTTTATACACTGCTGTGGTTAACAAGAGAGATGtttatactgtacactactgtggtTAACACAGAGAGATGTTTATACTGTGCACTACTGTGGTTAACACAGAGAGGTTTTTATACACTGCTGTGGTTAACAAGATAGATGtttatactgtacactactgtggtTAACACAGAGAGGTGTTGTCACACTGCTGTGGTTAACACAGAGATATGtttatactgtacactactgtggtTAACAAGATAGATGtttatactgtacactactgtggtTAACACAGAGAGGTGTTGTCACACTGCTGTGGTTAACACAGAGAGATGtttatactgtacactactgtggtTAACACAGAGGTTTTTATACACTGCTGTGGTTAACACAGAGAGGTTTTTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707619 True 1200 lncRNA 0.37 4 79799970 79801271

Neighbor

gene id symbol gene type direction distance location
hyal1 LOC106565982 coding upstream 398085 79398640 ~ 79401885 (+)
LOC110494654 LOC106565981 coding upstream 406790 79389233 ~ 79393180 (+)
tusc2 tusc2 coding upstream 412419 79382417 ~ 79387551 (+)
LOC110494653 rassf1 coding upstream 417681 79370819 ~ 79382289 (+)
nprl2 tusc4 coding upstream 433833 79359278 ~ 79366137 (+)
LOC110494656 LOC106566001 coding downstream 47211 79848482 ~ 79871163 (+)
LOC110494660 LOC106565999 coding downstream 73062 79874333 ~ 79882252 (+)
LOC110494661 LOC105025424 coding downstream 98747 79900018 ~ 79925378 (+)
LOC110494662 LOC106565996 coding downstream 125089 79926360 ~ 79930803 (+)
LOC110493270 LOC106565994 coding downstream 158590 79959861 ~ 79980095 (+)
G1493511 NA non-coding upstream 255022 79544446 ~ 79544948 (+)
G1493498 NA non-coding upstream 276674 79523024 ~ 79523296 (+)
G1493488 NA non-coding upstream 282165 79517297 ~ 79517805 (+)
G1493318 NA non-coding upstream 282807 79516782 ~ 79517163 (+)
G1493309 NA non-coding upstream 294377 79505388 ~ 79505593 (+)
G1493698 NA non-coding downstream 45964 79847235 ~ 79847725 (+)
G1493517 LOC106565995 non-coding downstream 141820 79943091 ~ 79950459 (+)
G1493733 NA non-coding downstream 171741 79973012 ~ 79973225 (+)
G1493734 NA non-coding downstream 172861 79974132 ~ 79974513 (+)
LOC110493267 LOC106565976 other upstream 463898 79321093 ~ 79336076 (+)
G1492310 NA other upstream 1024243 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1546662 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1609680 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1492169 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1535746 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1630940 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 2027461 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 2361935 82163138 ~ 82169750 (+)

Expression


Co-expression Network