G1493698


Basic Information

Item Value
gene id G1493698
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79847235 ~ 79847725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707636
gaaacacttatctccctcactagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccatctataatttagcccaaacaactacctctttccctattgtatttttttatttttatttatttattttgctcctttgcaccccattatttttatttctactttgcacattcttccactgcaaatctaccattccagtgtttttacttgctatattgtatttactttgccaccatggcctttttttgcctttacctcccttatctcacctcatttgctcacatcgtatatagacttgtttctactgtattattgactgtatgtttgttttactccatgtgtaactctgtgtcgttgtatctgtcgaactgctttgctttatcttggccaggtcgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaataaaggtgaaataaataaataaataaataaaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707636 True 491 lncRNA 0.36 1 79847235 79847725

Neighbor

gene id symbol gene type direction distance location
LOC110493268 LOC106582605 coding upstream 2922 79547816 ~ 79844313 (+)
hyal1 LOC106565982 coding upstream 445350 79398640 ~ 79401885 (+)
LOC110494654 LOC106565981 coding upstream 454055 79389233 ~ 79393180 (+)
tusc2 tusc2 coding upstream 459684 79382417 ~ 79387551 (+)
LOC110494653 rassf1 coding upstream 464946 79370819 ~ 79382289 (+)
LOC110494656 LOC106566001 coding downstream 757 79848482 ~ 79871163 (+)
LOC110494660 LOC106565999 coding downstream 26608 79874333 ~ 79882252 (+)
LOC110494661 LOC105025424 coding downstream 52293 79900018 ~ 79925378 (+)
LOC110494662 LOC106565996 coding downstream 78635 79926360 ~ 79930803 (+)
LOC110493270 LOC106565994 coding downstream 112136 79959861 ~ 79980095 (+)
G1493681 NA non-coding upstream 45964 79799970 ~ 79801271 (+)
G1493511 NA non-coding upstream 302287 79544446 ~ 79544948 (+)
G1493498 NA non-coding upstream 323939 79523024 ~ 79523296 (+)
G1493488 NA non-coding upstream 329430 79517297 ~ 79517805 (+)
G1493318 NA non-coding upstream 330072 79516782 ~ 79517163 (+)
G1493517 LOC106565995 non-coding downstream 95366 79943091 ~ 79950459 (+)
G1493733 NA non-coding downstream 125287 79973012 ~ 79973225 (+)
G1493734 NA non-coding downstream 126407 79974132 ~ 79974513 (+)
G1493740 LOC106565993 non-coding downstream 148914 79996639 ~ 79997179 (+)
LOC110493267 LOC106565976 other upstream 511163 79321093 ~ 79336076 (+)
G1492310 NA other upstream 1071508 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1593927 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1656945 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1445715 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1489292 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1584486 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 1981007 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 2315481 82163138 ~ 82169750 (+)

Expression


Co-expression Network