G1493734


Basic Information

Item Value
gene id G1493734
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79974132 ~ 79974513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707672
ccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccttaaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtctcctccttgtatgagctgaaagtttagagggacggccagatcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttggaaaatctttttgtatccaaatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707672 True 382 lncRNA 0.44 1 79974132 79974513

Neighbor

gene id symbol gene type direction distance location
LOC110494662 LOC106565996 coding upstream 43329 79926360 ~ 79930803 (+)
LOC110494661 LOC105025424 coding upstream 48754 79900018 ~ 79925378 (+)
LOC110494660 LOC106565999 coding upstream 91880 79874333 ~ 79882252 (+)
LOC110494656 LOC106566001 coding upstream 102969 79848482 ~ 79871163 (+)
LOC110493268 LOC106582605 coding upstream 129819 79547816 ~ 79844313 (+)
LOC110495196 LOC106565991 coding downstream 40596 80015109 ~ 80017775 (+)
LOC110494679 LOC106565990 coding downstream 50577 80025090 ~ 80041751 (+)
LOC110494682 edem1 coding downstream 64213 80038726 ~ 80047063 (+)
LOC118940652 NA coding downstream 312432 80286945 ~ 80286998 (+)
trnak-cuu-20 NA coding downstream 449365 80423878 ~ 80423950 (+)
G1493733 NA non-coding upstream 907 79973012 ~ 79973225 (+)
G1493517 LOC106565995 non-coding upstream 23673 79943091 ~ 79950459 (+)
G1493698 NA non-coding upstream 126407 79847235 ~ 79847725 (+)
G1493681 NA non-coding upstream 172861 79799970 ~ 79801271 (+)
G1493511 NA non-coding upstream 429184 79544446 ~ 79544948 (+)
LOC110493270 LOC106565994 non-coding downstream 5068 79959861 ~ 79980095 (+)
G1493740 LOC106565993 non-coding downstream 22126 79996639 ~ 79997179 (+)
G1493744 NA non-coding downstream 25749 80000262 ~ 80000478 (+)
G1493756 NA non-coding downstream 44050 80018563 ~ 80018788 (+)
G1493767 NA non-coding downstream 90592 80065105 ~ 80073213 (+)
tusc2 tusc2 other upstream 588695 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 638060 79321093 ~ 79336076 (+)
G1492310 NA other upstream 1198405 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1720824 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1783842 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1318927 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1362504 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1457698 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 1854219 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 2188693 82163138 ~ 82169750 (+)

Expression


Co-expression Network