Gene
RNA
| Item | Value |
|---|---|
| gene id | G1493740 |
| gene name | LOC106565993 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 79996639 ~ 79997179 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein piccolo-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1707688 | True | 298 | lncRNA | 0.62 | 2 | 79996639 | 79997179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493270 | LOC106565994 | coding | upstream | 16544 | 79959861 ~ 79980095 (+) |
| LOC110494662 | LOC106565996 | coding | upstream | 65836 | 79926360 ~ 79930803 (+) |
| LOC110494661 | LOC105025424 | coding | upstream | 71261 | 79900018 ~ 79925378 (+) |
| LOC110494660 | LOC106565999 | coding | upstream | 114387 | 79874333 ~ 79882252 (+) |
| LOC110494656 | LOC106566001 | coding | upstream | 125476 | 79848482 ~ 79871163 (+) |
| LOC110495196 | LOC106565991 | coding | downstream | 17930 | 80015109 ~ 80017775 (+) |
| LOC110494679 | LOC106565990 | coding | downstream | 27911 | 80025090 ~ 80041751 (+) |
| LOC110494682 | edem1 | coding | downstream | 41547 | 80038726 ~ 80047063 (+) |
| LOC118940652 | NA | coding | downstream | 289766 | 80286945 ~ 80286998 (+) |
| trnak-cuu-20 | NA | coding | downstream | 426699 | 80423878 ~ 80423950 (+) |
| G1493734 | NA | non-coding | upstream | 22126 | 79974132 ~ 79974513 (+) |
| G1493733 | NA | non-coding | upstream | 23414 | 79973012 ~ 79973225 (+) |
| G1493517 | LOC106565995 | non-coding | upstream | 46180 | 79943091 ~ 79950459 (+) |
| G1493698 | NA | non-coding | upstream | 148914 | 79847235 ~ 79847725 (+) |
| G1493744 | NA | non-coding | downstream | 3083 | 80000262 ~ 80000478 (+) |
| G1493756 | NA | non-coding | downstream | 21384 | 80018563 ~ 80018788 (+) |
| G1493767 | NA | non-coding | downstream | 67926 | 80065105 ~ 80073213 (+) |
| G1494061 | NA | non-coding | downstream | 97710 | 80094889 ~ 80095135 (+) |
| G1494064 | NA | non-coding | downstream | 98972 | 80096151 ~ 80096441 (+) |
| tusc2 | tusc2 | other | upstream | 611202 | 79382417 ~ 79387551 (+) |
| LOC110493267 | LOC106565976 | other | upstream | 660567 | 79321093 ~ 79336076 (+) |
| G1492310 | NA | other | upstream | 1220912 | 78770747 ~ 78775727 (+) |
| G1492003 | NA | other | upstream | 1743331 | 78252629 ~ 78253308 (+) |
| G1491963 | NA | other | upstream | 1806349 | 78189012 ~ 78190290 (+) |
| G1495346 | NA | other | downstream | 1296261 | 81293440 ~ 81293926 (+) |
| G1495362 | NA | other | downstream | 1339838 | 81337017 ~ 81338163 (+) |
| LOC110494696 | LOC106582736 | other | downstream | 1435032 | 81432188 ~ 81602161 (+) |
| LOC110494698 | LOC106566043 | other | downstream | 1831553 | 81828571 ~ 81847540 (+) |
| G1496351 | LOC106566032 | other | downstream | 2166027 | 82163138 ~ 82169750 (+) |
