G1493744


Basic Information

Item Value
gene id G1493744
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80000262 ~ 80000478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1707692
ccataattctatcttccTGAATCTTGCATACAAGCAAAAAATTCAAGCTTGAAGCACCAgtggtcaataaaaaagtggtcagatgaaacagatgctaagctacaggactgttttgctagcacagactggaatatgttctgggattcttcctaTGGCATAGAGcagtacatcacatcagtcattggcttcatcaataagtgcatcaatgacgtagtcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1707692 True 217 lncRNA 0.40 1 80000262 80000478

Neighbor

gene id symbol gene type direction distance location
LOC110493270 LOC106565994 coding upstream 20167 79959861 ~ 79980095 (+)
LOC110494662 LOC106565996 coding upstream 69459 79926360 ~ 79930803 (+)
LOC110494661 LOC105025424 coding upstream 74884 79900018 ~ 79925378 (+)
LOC110494660 LOC106565999 coding upstream 118010 79874333 ~ 79882252 (+)
LOC110494656 LOC106566001 coding upstream 129099 79848482 ~ 79871163 (+)
LOC110495196 LOC106565991 coding downstream 14631 80015109 ~ 80017775 (+)
LOC110494679 LOC106565990 coding downstream 24612 80025090 ~ 80041751 (+)
LOC110494682 edem1 coding downstream 38248 80038726 ~ 80047063 (+)
LOC118940652 NA coding downstream 286467 80286945 ~ 80286998 (+)
trnak-cuu-20 NA coding downstream 423400 80423878 ~ 80423950 (+)
G1493740 LOC106565993 non-coding upstream 3083 79996639 ~ 79997179 (+)
G1493734 NA non-coding upstream 25749 79974132 ~ 79974513 (+)
G1493733 NA non-coding upstream 27037 79973012 ~ 79973225 (+)
G1493517 LOC106565995 non-coding upstream 49803 79943091 ~ 79950459 (+)
G1493756 NA non-coding downstream 18085 80018563 ~ 80018788 (+)
G1493767 NA non-coding downstream 64627 80065105 ~ 80073213 (+)
G1494061 NA non-coding downstream 94411 80094889 ~ 80095135 (+)
G1494064 NA non-coding downstream 95673 80096151 ~ 80096441 (+)
G1494066 NA non-coding downstream 96751 80097229 ~ 80097768 (+)
tusc2 tusc2 other upstream 614825 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 664190 79321093 ~ 79336076 (+)
G1492310 NA other upstream 1224535 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1746954 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1809972 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1292962 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1336539 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1431733 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 1828254 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 2162728 82163138 ~ 82169750 (+)

Expression


Co-expression Network